Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03833 ATGATCACATCAGGGAGGTTGTTTTCTTCTCTTTGTTGTCTCCTCTTAATGTTAATCACATGCGACGCCCAACAATATGATTTCATATATTACGAGTGTCAGAATGAGAAAGGTAACTACACAGAAAACAGCACCTACCACAAAAACCTCAATACCCTGTTTTCCACTCTCGCTTCCGACACAAAAATCGACTACGGTTTCTACAACTTGTCGTACGGCCAAAACGACGACAAAGTAAACGCCGTTGGGCTTTGCCAAGGAGACCTTAACCAAAGCGATTGTAGAAGGTGTCTAAACGATTCGAGAATCGTTCTTCCAAAGCATTGCCCAAACCAGAAAGAAGCTGTAGGCTGGTACGATCAATGCATGCTCCAATACTCAAACCGCACCATCTTCGGCAGTGGCTACGTTGACAATACCCCTATGCAATACTTGATTAACACGGACAACGCAACGGATGTGCAAGTGTTCAAACAAGAACGCGCAAGCTTGATGTCAAATCTGAGAAACAACGTGAGTGCAACCGGTGACTCTCGCCGCAAATATGCTGCGGGGAGTGTCACTGGTACGGATTTTCAAACCATATATGGGCTTGTGCAGTGCACGCCGGATCTTTCTAGCCAAAAGTGTGACGAATGTTTGGAGGGGATCGTGGATGTAACTCTGAATGATGGGAAGAAAGGTGGGAGAGTTCTTACTCCAAGATGTCATATTAGGTTTGAAACATACCGTTTCTTTCAGTTTCAGCCTACTACTACTAATAATAACAACACTACTACTTCCAAATCGCGATCTGTGATCGTCGTAGCAGTGCCATCTGTTACTGTTTTGGTGCTCATCATGTGTTCTATATGCGTCTATTTAAAAGTGAAAAGGCCAAGCAAACTTTCTGCAACCACATATGTTGAAGAAGAAATCACGATGAACGAGTCATTGCAGTTCGACTTTGATACCATACGAGTTGCTACAAGTGATTTCTCAAATTCTAATAAACTAGGACAAGGTGGATTTGGAGCCGTTTATAAGGGTCAGCTCTCCAATGGACAAATTATTGCCGTCAAAAGGTTGTCAAAGGACTCTGGCCAAGGAGCTACGGAATTTAAGAATGAAGTGCTTTTATTGGCCAAACTTCAACATCGAAATTTGGTTAAGCTCCTTGGTTTTTGTTTGGAAGGAATTGAAAGGTTGCTTATTTATGAGTTTGTTCCTAAAAAAAGTCTTGATTACTTCATATTTGATCCAATCAAGAAACGACAATTGAATTGGACAAGTCGGTACAAAATCATTAAAGGTGTTGCTCGAGGTCTTCTTTATCTTCATGAAGATTCTAGATTTCGTATTATACATCGTGACCTCAAAACAAGTAATATCCTCTTAGATGATGATATGAATCCTAAGATAGCAGATTTTGGATTAGCGAAACTGTTTGGCACGGATCAAACTCAGGGAAATACGAATCAAATTGTGGGAACATATGGATATATGGCACCCGAATATGCAATGTACGGACAATTTTCAACAAAGTCAGATGTTTTTAGCTTTGGTGTAATAGTCCTTGAAATTGTGAGCGGCAAAAGGCACATTGAGAATGGCAGTGAGGAGAGTATAGAGCAGCTACTAAGCTTTGTTTGGAGAAATTGGAAGGAGAGAACAGCTATAAATATCATAGATCCATCATTAAGCAATATTTCACCAAATGACGTTATGAGATGCGTCCACATTGGTTTGCTTTGTGTTCAAGAAGATTTAGCGCATAGACCAAACATGAGTTCTATTGTATTGATGCTGGATAGTTGTTCTGTAACTATGCCAACACCTTCAGAACCTGCATTTTTTCTGGGGACTACTAGAACTAGAAGCCTTCCATTATCAGACATACATTCAGCGGAGAATAATACAACAACAAGAACAAGTGAATTCACAAGTAAATCAGCTCAAGAATCAGAAAATGAGGCTTCCGTTACTGAGCTATATCCTCGCTAA 1983 0.4044 MITSGRLFSSLCCLLLMLITCDAQQYDFIYYECQNEKGNYTENSTYHKNLNTLFSTLASDTKIDYGFYNLSYGQNDDKVNAVGLCQGDLNQSDCRRCLNDSRIVLPKHCPNQKEAVGWYDQCMLQYSNRTIFGSGYVDNTPMQYLINTDNATDVQVFKQERASLMSNLRNNVSATGDSRRKYAAGSVTGTDFQTIYGLVQCTPDLSSQKCDECLEGIVDVTLNDGKKGGRVLTPRCHIRFETYRFFQFQPTTTNNNNTTTSKSRSVIVVAVPSVTVLVLIMCSICVYLKVKRPSKLSATTYVEEEITMNESLQFDFDTIRVATSDFSNSNKLGQGGFGAVYKGQLSNGQIIAVKRLSKDSGQGATEFKNEVLLLAKLQHRNLVKLLGFCLEGIERLLIYEFVPKKSLDYFIFDPIKKRQLNWTSRYKIIKGVARGLLYLHEDSRFRIIHRDLKTSNILLDDDMNPKIADFGLAKLFGTDQTQGNTNQIVGTYGYMAPEYAMYGQFSTKSDVFSFGVIVLEIVSGKRHIENGSEESIEQLLSFVWRNWKERTAINIIDPSLSNISPNDVMRCVHIGLLCVQEDLAHRPNMSSIVLMLDSCSVTMPTPSEPAFFLGTTRTRSLPLSDIHSAENNTTTRTSEFTSKSAQESENEASVTELYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03833 660 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Aip09g03833 660 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 640 - -
Aip09g03833 660 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Aip09g03833 660 SMART serkin_6 326 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03833 660 Gene3D - 25 130 IPR038408 -
Aip09g03833 660 Gene3D - 138 245 IPR038408 -
Aip09g03833 660 CDD STKc_IRAK 332 597 - -
Aip09g03833 660 MobiDBLite consensus disorder prediction 623 653 - -
Aip09g03833 660 ProSiteProfiles Protein kinase domain profile. 326 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03833 660 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Aip09g03833 660 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
Aip09g03833 660 MobiDBLite consensus disorder prediction 623 660 - -
Aip09g03833 660 Pfam Protein kinase domain 327 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03833 660 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 640 - -
Aip09g03833 660 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Aip09g03833 660 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Aip09g03833 660 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Aip09g03833 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Aip09g03833 660 SUPERFAMILY Protein kinase-like (PK-like) 311 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03833 Aip-Chr9 144890269 144892934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03833 36 660 Receptor kinase-like Gene Family AT4G21410 46.979 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g03833 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03833 - - ahf:112776564 1275