Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03793 ATGAGCTGCAATGGATGCCGTGTGCTACGAAAAGGGTGCAGCGAAGAGTGCATGCTACGACATTGCCTGGTGTGGATACAGGACAATCCACCAGCACAGGGTTACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGCGCCAACCTCATGTCTTTCCTTTCCTCCGTTCCCACCAACCACAGATCCGCATTGTTTCAGTCACTTCTATATGAGGCAGTGGGTCGTACCATAAATCCGGTGAGTGGGGCGGTGGGGCTGCTCTCGACAGGCAACTGGCATCTCTGCCAGTCCGCGGTGGACAAGGTGCTGCGAGGGGGCGGCGCCGCCTTGATGGAAAGTAGTGATCATTTGAAAGAAGCAGAATCACAAGAGAGAATTGAAAAGGGTCAACCACCCAGCAACACAACAACTACTCATCATTGGCCTTCTCAAACGACTGAAACCAAGCTGCTTACGCTTTTCTTATGA 468 0.5321 MSCNGCRVLRKGCSEECMLRHCLVWIQDNPPAQGYATLFVAKFFGRANLMSFLSSVPTNHRSALFQSLLYEAVGRTINPVSGAVGLLSTGNWHLCQSAVDKVLRGGGAALMESSDHLKEAESQERIEKGQPPSNTTTTHHWPSQTTETKLLTLFL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03793 155 MobiDBLite consensus disorder prediction 114 144 - -
Aip09g03793 155 MobiDBLite consensus disorder prediction 127 144 - -
Aip09g03793 155 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Aip09g03793 155 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 126 - -
Aip09g03793 155 PANTHER LOB DOMAIN PROTEIN 1 126 - -
Aip09g03793 155 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03793 Aip-Chr9 144673522 144674147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03793 1 106 AS2 family AT3G49940 73.585 6.00e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip09g03793 LOB 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03793 - - gmx:100816269 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03793 09 144673522 144674147 Aip09g03793 09 144673522 144674147 ECH
Aip07g03515 07 125195309 125196203 Aip09g03793 09 144673522 144674147 ECH
Aip05g00575 05 6886391 6887786 Aip09g03793 09 144673522 144674147 PCT