Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03784 ATGCTACGATTATGCTATAGCCCTTTCGATTGTTGCTTCCGGCGACGCGTCGGCGGCTCTGATAGCCTTCTCTGGCACACTGACCTCAAGCCTCACTTCTCCGGTGACTTCTCCATCGCCGTCGCTCAGGCCAATAACAGCCTCGAAGATCAGAGCCAAGTCTTTACCTCCCCCTCCGCCACCTACATAGGCGTCTACGACGGCCACGGCGGCCCCGAGGCTTCCAGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAATTCGTCTCTGAACAAGGGGGATTGTCAGTGGATGTCATAAAGAAGGCGTTCAGTGCGACGGAGGAGGAGTTCTTGCATTTGGTGAAGCTGTCTTTACCAGTTAGTCCCCAGATTGCTTCAGTGGGATCATGCTGCCTTCTTGGCGCAATTTCTAATAATGTGTTGTATGTCGCTAACCTTGGAGACTCGAGAGCTGTTCTTGGCCGGAGGGACACAGAGAGCAAGAATTCTCCTGTGGTGGCACTGCGGTTGTCCACGGATCATAATGTAGCTGATGAAGAGGTGAGGCGAGAAGTTGAAGCCCTCCACCCTGATGATTCGCATATTGTGGTCTATACTCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTACAGTCACAACTCACAACAATACAAACTTTATTTATTTATCAACTTTGTGCATGA 693 0.5022 MLRLCYSPFDCCFRRRVGGSDSLLWHTDLKPHFSGDFSIAVAQANNSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFVSEQGGLSVDVIKKAFSATEEEFLHLVKLSLPVSPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRRDTESKNSPVVALRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVQSQLTTIQTLFIYQLCA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03784 230 SMART PP2C_4 30 230 IPR001932 -
Aip09g03784 230 Gene3D - 30 218 IPR036457 -
Aip09g03784 230 CDD PP2Cc 41 213 IPR001932 -
Aip09g03784 230 SUPERFAMILY PP2C-like 43 213 IPR036457 -
Aip09g03784 230 ProSiteProfiles PPM-type phosphatase domain profile. 36 230 IPR001932 -
Aip09g03784 230 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Aip09g03784 230 Pfam Protein phosphatase 2C 57 212 IPR001932 -
Aip09g03784 230 PANTHER ALPHABET, ISOFORM E-RELATED 4 215 - -
Aip09g03784 230 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03784 Aip-Chr9 144612021 144614345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03784 18 213 PP2C-type Phosphatase Gene Family AT3G51370 55.882 5.27e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03784 - K01102 gmx:100813810 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03784 09 144612021 144614345 Aip09g03784 09 144612021 144614345 ECH
Aip09g03784 09 144612021 144614345 Aip05g00588 05 7104832 7107590 ECH
Aip05g00588 05 7104832 7107590 Aip09g03784 09 144612021 144614345 PCT