Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03773 ATGCAAACACCGGATGCTGGAACAGAACAATGTCATTTGTCAGAGAAAACATCTCAGGTGGGTTCCGAATGTTTAGACAACAAGCAAGGTGTGCCTGGCAATGTGTTAGGCAGTTCTCTTATTGATGACCAAGCTTCTGAGAAAATGGCCAAGAGTTCTGAGTGTTTGGACAACAAGCAGAGCATGCCTAGTGATGTGTTAACAAGCTCCATGATTGATGAAAACTCAAACCGTGTGGCCGAGAATTCTGAGCTTTTGGACGACAAGCAAAGCATGCATAGTGATGTGTTAACCGATTCCGTGATTGATGAAAAATCAAACCAAGTTTCTGAAAAAATGACTGATGGTACGCAGTGTTTGGGCAACAAGAAAAACTTGCAAGGTGAAGTGTTAACCAATTGTGTAGTTGATGAAAAATCAAATGAGGTCTCTGAAAAAATGATCGAGGGTCCTGAGCATTTGGCCAGCAGGCAAAGCATGCATAGCGATGATGCATTGACCAATTCTGTGATTGATGAAAAATCAAACCAAGTTTCTGATAAAATGTTTGAGTGTCTTGAGCATTTGGCCAACAAGCAAAGCATGCATGGTGCTGTGTTAACCAAATCTGTGATTGATGAAAAGTTAAATCAAGTTTCTGACAAAATGACTGAGAGTCCAGAGTGTTTGGACAACAGGCAAAGCCTGCATGGTGATGTGCTAACCAATTCTGTGATTGATGAAAAAACAAACCAAGTATATGAAAAAATGACTGAGAGTCCTGAGCGTTTGGACAAGAAGCAAGGCATGCATGGCGATGTGTTAATCAATTCTGTGATTCGTGAAAACTCAAACCATGTTTCTCGCAAAATGACCGAGAGTTCTCAGTGTTTGGACAACAAGCAAAGTGTAATTGACGAGGTGTTAACCAGTCATGTGATTGATGAAAAATCGAACCAAGTTTCAGACAAAATGACAGAGAGTTCTCAGTGTTTACACAATGCACAAAGCATGCCAAGCAATGTGTTAACCAGCTCTGTTATTGATGAAAACTCAAACCAAGTTTCTGGAAAAATTATTAGGGGTGCTGTTATTGCACTGCCTGCACAACGCCAGCGTGATTTGAAAAAGAGTTGTCAAACTGCAGAAGGTTCATGCTCTCAACGGAGTACCTCAGAACAAGACCCCTCTCATTTGTCTAATGACAAATCAGAGATCAAATGTCAGCCTTTTTCTCAGAATGGCCAAAATGTGTCCGTGGAAATAAATAATCCTGTAACTGGTTCTCTTGTTGAGAACCAAACGCTATCTGTTCCAACACAAGTGAACACCACTTCTGCAAATGGACTACAGGATCCAGCTCCAGCATCTGTAGATGTGAAAAATACTGGTTTGAATTGTTCAAAAAGAAAATCTACAGCCACAACATCTATGCAGTTGAGCTGCAAGGGTAAAAAAAGCTCAAAATTATTAAAGAAGAAGTATATGCTAAGGTCATTAGGAAGCAGTGATAGAGCTTTGCGATCAAGGACACGCGAAAAACCTAAACCACCTGAGTCAAATAGCAATTTGGTTGATGCTAATAATGATGGCGTGAAGAATAAAAGGGGGAAGAAGAAGAACAAAAAGAGAGACGGGGAAGGAGTTATTGATGAATTTTCTAGAATAAGAGCTCGCTTAAGATATTTATTGAAACGAGTTAGCTATGAGCAGAACTTGATTGATGCTTATTCTAGTGAGGGCTGGAAAGGATACAGTTTGGAAAAGTTAAAGCCTGAAAAGGAGCTTCAACGGGCTAAGACTGAAATACTTCGACGTAAATTGAAAATGAGGGATCTCTTTCGATATTTGGATTCATTGTGTGCTGAAGGAAGGCTTCCTGAATCTGTGTTTGATTCTGAAGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAATGTAGTTCCAAAGAGTTGAGCACAAACAATGATATAATTCTCTGTGACGGTGCTTGTGAACGTGGATTTCACCAGCTTTGTGTGGATCCTCCTTTGTTAACTGAAAACATTCCACCTGGCGATGAGGGTTGGCTATGCCCGGGATGTGATTGCAAAGATGACTGTATTGAAATTGTTAATGACTCCTTAGGAACACGTCTCTCTCTTGAGGATAGCTGGGAGAGGGTTTTTCCAGAAGCAGCTGCAGTTGATGCATTCAATGTGGATCACAACTCAGGACTTCCTTCTGATGATTCTGATGATGATGATTATGATCCTGATGTTAAAGAAGATGTGGAGGCTGAAGGGGGTGAATCAAGTTCTGATGAATCTGAGTATGCTTCTGCTTCTGAGAAATTGGAGGATTCAGGCCATGAGGATCAGTACATGGGCCTTCCTTCTGAAGATTCTGAGGATGATGATTATAATCCTGATGCTCCAGATCAAGACATGAAAGTTGCAGAGGAAAGTTCGAGCTCTGATTTCACATCTGATTCTGAGGATCTTGCTGCTACAATTAATGATAATATGCCCCCAGGACACGGTGAAGATATCACATCTGCATCATTGGATGATGCAAAGAAGTTTAAAGGATCCAGCAAAACAAGTAAAGTCGGTAAGAAGCCATCTATAACTGATGAATTGTCATCTTTACTAGAGGCAGATCCTGGCCAAGAGAGTTACACTCCTGTTTCGGGGAAAAGAAATGTGGAAAGGTTGGACTACAAAAAGCTGTATGATGAGACATACAAAAGTGATACTAGTGATGATGATGAAGACTGGAATGCTACTGCTACCCCAACTAGGAAGAAGAATGTCACTGGTAAATTGACTCCAGTGTCACCAAATAGAAAAGCCTCAAATAATTCTACACATACTCTGAGAAGTGACGGTAAAGCTGAAAAAACAAATAACTCAGCTGCTAAATCACTTGAAGGCTCTGGAAAATCAGGTTCCGGGGAGAAAAAACCAAGATCTTCAACATACAACAGACTTGGAGATGTTGCAATTGAGAGACTTTACAAATCTTTCAAAGAGAATCAGTATCCAGATCGGACCACAAAAGAAAGCTTGGCACAAGAAACAGGACTCACACTTCAGCAGGTAAGTAAATGGTTTGACAACACCCGATGGAGCTTTAGGCATTCATCCCATAAGGAACCCAGGACAGGTGAAAATGCTTTGGCGCAGACCACTGATAACATATCTGAAAATGAGGTGGCACCTGGTGGAGAGAACAGGGACAGTGAATTATTCCCCCAAGATGTCACCGGAGAAAACTCAAAAACCCCAAGCTCTAAGAAGAGGAAGGGTATGTCTGAACCCCTGGCATCTGAGTCTCCTCAGAATGCTGATAAAGCATCAAGTCATAAAATGAAGACAAGGAAAAGAAAATGA 3354 0.41 MQTPDAGTEQCHLSEKTSQVGSECLDNKQGVPGNVLGSSLIDDQASEKMAKSSECLDNKQSMPSDVLTSSMIDENSNRVAENSELLDDKQSMHSDVLTDSVIDEKSNQVSEKMTDGTQCLGNKKNLQGEVLTNCVVDEKSNEVSEKMIEGPEHLASRQSMHSDDALTNSVIDEKSNQVSDKMFECLEHLANKQSMHGAVLTKSVIDEKLNQVSDKMTESPECLDNRQSLHGDVLTNSVIDEKTNQVYEKMTESPERLDKKQGMHGDVLINSVIRENSNHVSRKMTESSQCLDNKQSVIDEVLTSHVIDEKSNQVSDKMTESSQCLHNAQSMPSNVLTSSVIDENSNQVSGKIIRGAVIALPAQRQRDLKKSCQTAEGSCSQRSTSEQDPSHLSNDKSEIKCQPFSQNGQNVSVEINNPVTGSLVENQTLSVPTQVNTTSANGLQDPAPASVDVKNTGLNCSKRKSTATTSMQLSCKGKKSSKLLKKKYMLRSLGSSDRALRSRTREKPKPPESNSNLVDANNDGVKNKRGKKKNKKRDGEGVIDEFSRIRARLRYLLKRVSYEQNLIDAYSSEGWKGYSLEKLKPEKELQRAKTEILRRKLKMRDLFRYLDSLCAEGRLPESVFDSEGEIDSEDIFCAKCSSKELSTNNDIILCDGACERGFHQLCVDPPLLTENIPPGDEGWLCPGCDCKDDCIEIVNDSLGTRLSLEDSWERVFPEAAAVDAFNVDHNSGLPSDDSDDDDYDPDVKEDVEAEGGESSSDESEYASASEKLEDSGHEDQYMGLPSEDSEDDDYNPDAPDQDMKVAEESSSSDFTSDSEDLAATINDNMPPGHGEDITSASLDDAKKFKGSSKTSKVGKKPSITDELSSLLEADPGQESYTPVSGKRNVERLDYKKLYDETYKSDTSDDDEDWNATATPTRKKNVTGKLTPVSPNRKASNNSTHTLRSDGKAEKTNNSAAKSLEGSGKSGSGEKKPRSSTYNRLGDVAIERLYKSFKENQYPDRTTKESLAQETGLTLQQVSKWFDNTRWSFRHSSHKEPRTGENALAQTTDNISENEVAPGGENRDSELFPQDVTGENSKTPSSKKRKGMSEPLASESPQNADKASSHKMKTRKRK 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03773 1117 MobiDBLite consensus disorder prediction 374 405 - -
Aip09g03773 1117 CDD homeodomain 974 1036 IPR001356 GO:0003677
Aip09g03773 1117 MobiDBLite consensus disorder prediction 990 1004 - -
Aip09g03773 1117 Pfam Homeodomain 988 1031 IPR001356 GO:0003677
Aip09g03773 1117 MobiDBLite consensus disorder prediction 494 540 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 498 512 - -
Aip09g03773 1117 SUPERFAMILY Homeodomain-like 973 1037 IPR009057 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 1042 1058 - -
Aip09g03773 1117 SMART PHD_3 636 689 IPR001965 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 436 457 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 808 823 - -
Aip09g03773 1117 PANTHER HOMEOBOX PROTEIN HAT3.1 412 1089 - -
Aip09g03773 1117 SMART HOX_1 973 1039 IPR001356 GO:0003677
Aip09g03773 1117 SUPERFAMILY FYVE/PHD zinc finger 626 694 IPR011011 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 1 25 - -
Aip09g03773 1117 CDD PHD_PRHA_like 636 688 IPR045876 -
Aip09g03773 1117 Pfam PHD-finger 636 691 IPR019787 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 888 917 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 727 1117 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 374 388 - -
Aip09g03773 1117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 685 IPR013083 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 735 759 - -
Aip09g03773 1117 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 412 1089 - -
Aip09g03773 1117 ProSiteProfiles Zinc finger PHD-type profile. 634 691 IPR019787 -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 1 64 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 918 965 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 1005 1029 - -
Aip09g03773 1117 ProSitePatterns Zinc finger PHD-type signature. 637 688 IPR019786 -
Aip09g03773 1117 ProSiteProfiles 'Homeobox' domain profile. 975 1035 IPR001356 GO:0003677
Aip09g03773 1117 Gene3D - 978 1046 - -
Aip09g03773 1117 MobiDBLite consensus disorder prediction 764 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03773 Aip-Chr9 144523088 144530268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03773 440 1032 Homeobox Transcription Factor Family AT3G19510 44.025 4.51e-129 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Aip09g03773 PHD 2.6e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03773 - - aip:107617775 1844.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03773 09 144523088 144530268 Aip09g03773 09 144523088 144530268 ECH