Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03765 ATGGAGGCCAAGGTTGATTTTGAGGTGGACAATTTGACCACAGCTACAGGGAGCAGTAGTTTCTCTCAACTACTCTTCGGAGATGACGATGATCATCATCAACATGCATTGGGTTTTGCTGCTGCTGTGGACCATCTCCCTCTTTTCTCCATTGACAAGCCACCCAAAATGCTCTCTTTTGGAGACTTTCAACCCCACCTCTTGCTCCCTGAAACCAACGCTACCCCTCAGAAATCTGTAATCACTTCAAGTGATTCTTCTTCTGCTTCTTCATGCAACCACACCACCACCGCCATTAACTCCATGTCCAAGACCAATAGTTTGCAGAAAAAGCGAAATTGGCCGGGGCTACAACCCATTGTGAAGGTGCCTAACAGTAACAACAAGAAGAACAAAACAGAGAATCCTCCGAGTTCAACTTCAAGCGGTCATGCAAAGAAGAAGGAGAAACTCGGGGAACGAATTGCAGCATTGCAACAACTAGTTTCTCCCTTTGGGAAGACAGATACAGCTTCGGTGCTTCACGAGGCAATGGGCTACATAAGATTTCTCCATGACCAAGTTCAAGTGCTATGCTCCCCTTACTTGCAGCGCTTGCCTTCTTCTTCTTCTTCTCCTTCTTCATTTCAACATCAATGTGGGGAGGAGGAGGAGCAAGTGAAAGAAGACAAGAGGGACTTGAAGAGCATGGGACTCTGCCTCATCCCCCTCCAATCCACCCTACACGTGTCAAGTACCAACGGTGCTGATTTCTGGTCACCTGCTGGTGCAGCCAACAATCTTACACCTTATGCACACCACCAATCCAAATAG 813 0.4736 MEAKVDFEVDNLTTATGSSSFSQLLFGDDDDHHQHALGFAAAVDHLPLFSIDKPPKMLSFGDFQPHLLLPETNATPQKSVITSSDSSSASSCNHTTTAINSMSKTNSLQKKRNWPGLQPIVKVPNSNNKKNKTENPPSSTSSGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQRLPSSSSSPSSFQHQCGEEEEQVKEDKRDLKSMGLCLIPLQSTLHVSSTNGADFWSPAGAANNLTPYAHHQSK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03765 270 MobiDBLite consensus disorder prediction 120 142 - -
Aip09g03765 270 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 72 247 - -
Aip09g03765 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Aip09g03765 270 Gene3D - 145 200 IPR036638 GO:0046983
Aip09g03765 270 CDD bHLH_AtbHLH_like 146 191 IPR045239 -
Aip09g03765 270 MobiDBLite consensus disorder prediction 78 149 - -
Aip09g03765 270 MobiDBLite consensus disorder prediction 203 222 - -
Aip09g03765 270 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 72 247 - -
Aip09g03765 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 196 IPR036638 GO:0046983
Aip09g03765 270 MobiDBLite consensus disorder prediction 78 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03765 Aip-Chr9 144458529 144460210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03765 131 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 52.381 3.93e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03765 - - gmx:100809317 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03765 09 144458529 144460210 Aip09g03765 09 144458529 144460210 ECH