Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03748 ATGGCCACGTTTTCCATTGGGACACACACGCACTTGTGCATGTTCCACCATTTCCGGAACTCTAGGCTCTCACTTCATCGTCTTCACTCTCTTCAATCCTCGCCCCCCTCTCTCTGTAGAATCAGAGGGCCCAGCTTGCTCCGTAATCATGTCTTGGCGCGTGCAGAAGATAAGGCCAGAGGTTCCTCCACTTCTTCCCAGCAGCAGTTCCAGGACTTACCAACTGAATCTGGAACCTGTGATCCCCTATGTTCACTTGATGAAACAAGCTCACAAGATTTTGAGAGCAGTTACAAGCCCAAGACCGATTTGCTCAAAGCTGTTGCGGTATTTGCAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCCGCAAATCAGGATCTTGCCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCATATTTGAGGAATCTCTAGCTTTCAACAAAAGTGGAGTAGGACTTTTGATGGCTGTAAGCTTGTGGACTATAAGAAGTATTGGGGCTCCATCAACTGGTGTAGCTGTTTCTGAGCTAACGCGTGCGTCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGATTTAAGCTAGTTACTGACAATATAACAACTCGAAAGCCACGACTTCTCCTTTGGGTGATTGGATTTGTGACATTTTTTCTCAGTTCAGTTTTAGACAACCTTACCTCTACAATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCCCCATCAGAGTATCGAAAGATTCTTGGAGCCGTTGTTGTAATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGCTGTGGATACATGGTCAAATATCTACAGTGCAAACAATGAAGGGTTTGTTTGTACCTTCAGCCATTTCTCTAGCTGTTCCATTGGCGCTCATGTCCCTGACTAGGTATCCTTCTATCTCTAGAAAAATCTGCCAGNNNGGGACAGGATTCTCCAAATGTCTTGGCTTCCGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGGGCTTTGATTTTTGTCCCCGTGTTCAAGGCCCTCACAGGCTAAAAGTGCCGCAGGCTCTGTCAAGAATAGACACTCAAGGAGCTCTATTCTTCCTGGGAATTCTATTGTCTGTTAGCAGTGAACTGATTGCAAGTGCCATTGGGGTCATATCAGCAATAATTGACAACGTTCCATTGGTTGCTGCTGCAATGGGAATGTATGATCTTGCGTCTTTCCCTCAGGATTCTGAGTTCTGGCAACTGATTGCATTCTGTGCCGGTACTGGTGGGTCCATGTTAGTTATTGGCTCGGCTGCCGGAGTTGCATTCATGGGAATGGAGAAGGTGGATTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCTTTTGCGGGTTATGCTGCCGGTATTGCTGCTTATTTAGCATTACATAACCTCAACATATCCCCGCCTACAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1569 0.4576 MATFSIGTHTHLCMFHHFRNSRLSLHRLHSLQSSPPSLCRIRGPSLLRNHVLARAEDKARGSSTSSQQQFQDLPTESGTCDPLCSLDETSSQDFESSYKPKTDLLKAVAVFAAAATGAVAINHSWVAANQDLAMALLFVIGYVGIIFEESLAFNKSGVGLLMAVSLWTIRSIGAPSTGVAVSELTRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAISLAVPLALMSLTRYPSISRKICQXGTGFSKCLGFRTDGSSRTACFLSWFRGFDFCPRVQGPHRLKVPQALSRIDTQGALFFLGILLSVSSELIASAIGVISAIIDNVPLVAAAMGMYDLASFPQDSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISPPTTLAEVPFLSGS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03748 522 Pfam Citrate transporter 142 326 IPR004680 GO:0016021|GO:0055085
Aip09g03748 522 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 378 406 IPR045016 GO:0006814|GO:0015297
Aip09g03748 522 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 407 522 IPR045016 GO:0006814|GO:0015297
Aip09g03748 522 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 328 IPR045016 GO:0006814|GO:0015297
Aip09g03748 522 PANTHER BNAC03G40960D PROTEIN 407 522 - -
Aip09g03748 522 PANTHER BNAC03G40960D PROTEIN 378 406 - -
Aip09g03748 522 PANTHER BNAC03G40960D PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03748 Aip-Chr9 144310396 144316571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03748 1 522 Antiporters AT3G19490 64.384 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03748 - - gmx:100779521 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03748 09 144310396 144316571 Aip09g03748 09 144310396 144316571 ECH