Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03739 ATGGAATCGGTCCCTGCTGATGTATCAAATTTACCTCCTAGTAAAGACCCATCTCCTTCACCTCCAGTCAAAGAGACCGATGGACAAGCTTCTTCAGCTCCTGTAGCCTTTGGGCAAGATAGTTCTGCACATGTGGCACCATCTAAGCCATCCTCCACCGGGGCATCATCTTGGGCCAAAAACTTGAACATTTCTCAGCCATCTGGCTCACAAGATGACCCATCCACTGGAAATGCTGGGAAATCAACCTTTGCCCGCATAACCAGTAATTTGGGATTGCGTTTGTCACCAAAGTCTCCTCCGGCAGATGACAGTTCCAATGAGACACCAGCACAATCTAATATTTTTGGAAGTATCACAAGAGGTTTGGTTGACACTTCTAAGAATGCAGTGAAAGCTGTCCAGGTTAAGGCACGACATGTCGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATCATTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTTATTAAGTTTTTTGAGACTCACCATAAGGATAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGAAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGGTTATCTCATTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGAACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTAAAGTTCTTTCCAACTGCTGAGGAGTCAATGGATTACTATAATCAAAAACGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAACCCACCTGCCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCACAGGTGCCCTTACTGGATCAGGCCCTCTATAACTGTCTCAGACCATAGTGGTGTGCTGTTCTCTACCAAAAAGCATCCAAGGACCAAGGATCTTTTGCCGGAAGATTTCTGGTTCAGTGCTCCAAAGAAGGGAGTAATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAATTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGACTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCAATGATCTTGATGGCTTTGACAAGGTAAATCTATTGTGCTCCTTTTATGATCATCTTTGA 1365 0.4264 MESVPADVSNLPPSKDPSPSPPVKETDGQASSAPVAFGQDSSAHVAPSKPSSTGASSWAKNLNISQPSGSQDDPSTGNAGKSTFARITSNLGLRLSPKSPPADDSSNETPAQSNIFGSITRGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTNDLDGFDKVNLLCSFYDHL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03739 454 MobiDBLite consensus disorder prediction 24 114 - -
Aip09g03739 454 SMART PTEN_C2_2 331 450 IPR014020 -
Aip09g03739 454 ProSiteProfiles C2 tensin-type domain profile. 333 454 IPR014020 -
Aip09g03739 454 MobiDBLite consensus disorder prediction 1 114 - -
Aip09g03739 454 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Aip09g03739 454 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Aip09g03739 454 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 19 446 - -
Aip09g03739 454 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Aip09g03739 454 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Aip09g03739 454 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Aip09g03739 454 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Aip09g03739 454 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 19 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03739 Aip-Chr9 144237994 144243000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03739 38 446 Protein tyrosine phosphatase (PTP) family AT3G19420 80.145 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03739 K01110 - gmx:100784003 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00607 05 7459991 7465989 Aip09g03739 09 144237994 144243000 PCT