Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03725 ATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATACTGGGTCTGACACATGACAAAAATGATCATGCAATTAAAGTGAAAAACACTCTGATCTTCAATGCATTTGTTCTGTCTCAAATCCGCGAGTTCACTTCAACAGTCAGGCTTAATTGGAAGCAGTGGCTGATCTCTGTCATCATTGGGTTCATAAGTTGGCCTCTTGCTGTGGTTGGTAAATTGATACCAGTTCCAAATACTCCCATCAACAATGTATTTTCAAGATTTCGGGGTTGA 288 0.4062 MYQVSVLLVLNFRGRSILGLTHDKNDHAIKVKNTLIFNAFVLSQIREFTSTVRLNWKQWLISVIIGFISWPLAVVGKLIPVPNTPINNVFSRFRG 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03725 95 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 81 IPR023298 -
Aip09g03725 95 PANTHER - 47 92 IPR000528 GO:0006869|GO:0008289
Aip09g03725 95 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 47 92 - -
Aip09g03725 95 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 45 - -
Aip09g03725 95 PANTHER - 1 45 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03725 Aip-Chr9 144116506 144116793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03725 1 88 Primary Pumps ATPases AT5G57110 47.692 7.18e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03725 K01537 - gmx:100820121 146.747