Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03724 ATGGGACGGTCATCTCCTAATGACAAATTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCTGATATTATTATTTTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTGGATGGGGACGTTCTGTTGCAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACCAACTGATCACCTTATGGTTGGCCTCCAGTGGGCCGAAGAGAACCTCTCATAA 354 0.4379 MGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVDGDVLLQLLWVNLIMDTLGALALATEPPTDHLMVGLQWAEENLS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03724 117 Gene3D - 3 71 IPR023214 -
Aip09g03724 117 Gene3D - 77 107 - -
Aip09g03724 117 SUPERFAMILY HAD-like 3 93 IPR036412 -
Aip09g03724 117 PANTHER CATION TRANSPORTING ATPASE 79 106 - -
Aip09g03724 117 PANTHER CATION TRANSPORTING ATPASE 1 73 - -
Aip09g03724 117 PRINTS P-type cation-transporting ATPase superfamily signature 26 45 - -
Aip09g03724 117 PRINTS P-type cation-transporting ATPase superfamily signature 50 62 - -
Aip09g03724 117 Pfam Cation transporting ATPase, C-terminus 79 106 IPR006068 -
Aip09g03724 117 PANTHER CALCIUM-TRANSPORTING ATPASE 79 106 - -
Aip09g03724 117 PANTHER CALCIUM-TRANSPORTING ATPASE 1 73 - -
Aip09g03724 117 Pfam haloacid dehalogenase-like hydrolase 3 40 - -
Aip09g03724 117 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 3 74 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03724 Aip-Chr9 144116007 144116470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03724 1 106 Primary Pumps ATPases AT5G57110 70.629 2.35e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03724 K01537 - gmx:100792945 180.644