Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03723 ATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCCGCTTGTGAGACAATGGGCTATGCAACAACCATTTGCAGTGATAAGACTGGCACGTTGACCATGAATCAGATGACTGTGGTGGAGGCTTATGCTGGTGGGAAGAAGAATGATCCTCCTGGTAACAAGTCAGAGCTCTCTCCCAAGCTCCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTAACGATGTTGAGGAATCATCAATTATTCACGTTTTCCCTTTCAATTCTGAGAAAAAACGAGCCGGAGTTGCAGTACAAACGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTGCTGAGATTGTCCTAGCCTGCTGTACACGAACATTTGAAAAGGAGAATGTTCCAGCCACTGAAGAAGAACGGGTTCACTGGTCTTTACCAGAAGATACTCTTGTTTTGTTAGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTGGAGTGGAATACTTAA 603 0.4461 MMADKALVRRLSACETMGYATTICSDKTGTLTMNQMTVVEAYAGGKKNDPPGNKSELSPKLHSLLIEGVAQNTNGSVNDVEESSIIHVFPFNSEKKRAGVAVQTADSEVHIHWKGAAEIVLACCTRTFEKENVPATEEERVHWSLPEDTLVLLAIVGLKDPCRPGVKDSVELCQKSGVKVKMVTGDNVKTAKAIAVEWNT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03723 200 Gene3D - 142 200 IPR023214 -
Aip09g03723 200 Pfam Cation transport ATPase (P-type) 81 126 - -
Aip09g03723 200 Gene3D - 21 33 IPR023214 -
Aip09g03723 200 SUPERFAMILY HAD-like 21 198 IPR036412 -
Aip09g03723 200 Gene3D - 1 20 - -
Aip09g03723 200 PANTHER CALCIUM-TRANSPORTING ATPASE 81 130 - -
Aip09g03723 200 PANTHER CALCIUM-TRANSPORTING ATPASE 1 77 - -
Aip09g03723 200 PANTHER CALCIUM-TRANSPORTING ATPASE 127 197 - -
Aip09g03723 200 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 84 197 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip09g03723 200 PANTHER CATION TRANSPORTING ATPASE 1 77 - -
Aip09g03723 200 PANTHER CATION TRANSPORTING ATPASE 127 197 - -
Aip09g03723 200 PRINTS P-type cation-transporting ATPase superfamily signature 176 186 - -
Aip09g03723 200 PRINTS P-type cation-transporting ATPase superfamily signature 154 165 - -
Aip09g03723 200 PRINTS P-type cation-transporting ATPase superfamily signature 24 38 - -
Aip09g03723 200 ProSitePatterns E1-E2 ATPases phosphorylation site. 26 32 IPR018303 -
Aip09g03723 200 PANTHER CATION TRANSPORTING ATPASE 81 130 - -
Aip09g03723 200 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 30 166 IPR023299 GO:0000166
Aip09g03723 200 Gene3D - 34 49 IPR023299 GO:0000166
Aip09g03723 200 Gene3D - 69 141 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03723 Aip-Chr9 144115125 144115908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03723 1 197 Primary Pumps ATPases AT5G57110 53.731 2.80e-81 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03723 K01537 - ahf:112750285 345.51