Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03677 AGAATCAAATCCTTTGTTGAATTGAGCATGTATGAATTTGTTGTTTTGGTATTGATGCTTGTGGTGGCCGCAGCCACCGGAGAGAGAAGAGAATGTCCAGCTTCATTCAATTGTGGAGGTAATGTTGGGAACATCAGCTTCCCTTTCACTACAGCAGAGCGTCAGGAGTGTGGGCTTTTGGCCATACACAATTGTTCTGAGCCACCGCAGGTGAAAAGATGGGTGCAACTAAGTCACAAAGGCAAAACATTTTTAGTTATACGCGTATCTCAACAGAATGTTATTCAATTCAGAGATAAGGACTTGTACGATCTTCTGCAATCAAGAAATTGCAATGCCTTCCGATATAACTTTACTCTTTCTACTCCTCCCACCTTTCATGATTTTGCTTCCCTTGATATGGAATACAATACAACCCTCTATAGATGCAACCGTACCCTCCATGTTCCCCCTACTAAGGATATGTGCAATTATACGAATTGCACTGACATCGATATCTACTACGGCCTTTTCATGCGCACACCACAAATTGAGAGTTCGTTGGCCTCATGCACAAAGGTCTTGCTTCCAATCAAAGATGTTCCTGATGGCAATGATCCCTTCACATTCGTAAATGCTGATATCATCGCTAAGGTCACTTTGTCGCAAGAATGCACAGACTGTCACTATAAGCAAAGAGGCCAGTGCCAACTTGACAGCAAAAGCAAATTTTGTTGTGCCAACGTTAGGCCGCCGGAAAATACAAGTGAGACAACTTGCTTGAGAGGTTCTTATTTAACGTTTTTGTTAGCTCACAGCCACATTGAATCAAGATACTCTTATTCTGATTCCTCTTCCAATCCACACCTAGATAATGGTGCTGCTTACCTCGGAGTTCCACTCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAACTTTGACCATAACAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTACGGGAAACTCCAAGATGGAAGAGAAGTTGCTGTGAAGCGCTTGTATGAACACAACTACAGGAGAGTAGAGCAATTCATAAATGAAGTTCAGATCCTAACACGTTTGAGACACAAAAATCTTGTGTCTCTCTATGGCTGCACTTCGCGCCACAGCCGCGAACTGCTGCTTGTATATGAATATATTTCTAATGGCACGGTTGCTTGTCATCTCCATGGCGAATCAGCCGAGCGCAGCTTACTACCTTGGTCTACAAGAATCAAAATTGCCATAGAGACTGCTACTGCATTGGCTTATCTTCATGCTTCTGACATCATTCACCGTGATGTGAAGACCAACAACATTCTCCTTGACCATAACTTTACTGTCAAGGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCATGGACGCAACCCATGTATCCACCGCGCCACAAGGGACTCCTGGTTATGTTGACCCTGAATATCACCAGAATTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGCTAATATCATCCATGCCTGCAGTTGATATGAACAGGGATAAGGATGAGATTAACTTATCAAATCTAGCCATGAAGAAGATTCAAAATAGTGCAATTATTGACTTGGTTGATCGTTCTCTCGGTTTTGATTCAGACAATAAGGTAAGGAGAATGATAGTTTCGGTGGCGGAGTTGGCTTTTCAGTGTTTGCAAAGAGACAAGGAGTTGAGACCTTGCATGGATGAAGTCTTGGATGAACTGAAGAAGATTGAGAGTGGCAAGGATCATGCAGAGCTTCAAGAGGAAGCTGATGTTGATGGTAATGAAGTTTCTCACAATAAGATTGTACATTCACTTCCACCACCATCACCTGAATGGGATGAAGTTGGATTATTGAAGCATATGAAGATACCACCACCTTCACCAATCACTGTCACTGATAATTGGGAAAGTAAATGCACCACGCCCAGCATCAGTGCTTAG 1959 0.4273 RIKSFVELSMYEFVVLVLMLVVAAATGERRECPASFNCGGNVGNISFPFTTAERQECGLLAIHNCSEPPQVKRWVQLSHKGKTFLVIRVSQQNVIQFRDKDLYDLLQSRNCNAFRYNFTLSTPPTFHDFASLDMEYNTTLYRCNRTLHVPPTKDMCNYTNCTDIDIYYGLFMRTPQIESSLASCTKVLLPIKDVPDGNDPFTFVNADIIAKVTLSQECTDCHYKQRGQCQLDSKSKFCCANVRPPENTSETTCLRGSYLTFLLAHSHIESRYSYSDSSSNPHLDNGAAYLGVPLFSYKDLKEATNNFDHNKELGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFINEVQILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGESAERSLLPWSTRIKIAIETATALAYLHASDIIHRDVKTNNILLDHNFTVKVADFGLSRLFPMDATHVSTAPQGTPGYVDPEYHQNYQLTSKSDVYSFGVVLIELISSMPAVDMNRDKDEINLSNLAMKKIQNSAIIDLVDRSLGFDSDNKVRRMIVSVAELAFQCLQRDKELRPCMDEVLDELKKIESGKDHAELQEEADVDGNEVSHNKIVHSLPPPSPEWDEVGLLKHMKIPPPSPITVTDNWESKCTTPSISA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03677 652 Coils Coil 572 592 - -
Aip09g03677 652 CDD STKc_IRAK 313 582 - -
Aip09g03677 652 ProSiteProfiles Protein kinase domain profile. 307 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03677 652 Gene3D Phosphorylase Kinase; domain 1 280 383 - -
Aip09g03677 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Aip09g03677 652 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Aip09g03677 652 MobiDBLite consensus disorder prediction 632 652 - -
Aip09g03677 652 SMART serkin_6 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03677 652 Pfam Protein tyrosine and serine/threonine kinase 310 579 IPR001245 GO:0004672|GO:0006468
Aip09g03677 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 651 IPR044652 -
Aip09g03677 652 MobiDBLite consensus disorder prediction 636 652 - -
Aip09g03677 652 SUPERFAMILY Protein kinase-like (PK-like) 290 583 IPR011009 -
Aip09g03677 652 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 10 651 - -
Aip09g03677 652 Gene3D Transferase(Phosphotransferase) domain 1 384 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03677 Aip-Chr9 143629449 143632173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03677 22 652 Receptor kinase-like Gene Family AT1G25390 47.538 3.24e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip09g03677 PK_Tyr_Ser-Thr 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03677 - - ahf:112712053 1142.49