Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03671 ATGGTACTAATTTATGTTTTGCGGTTCTTTTTGGTTTCACATCTACTCCTCAACTGGGGTGTGAATGGGGACCGTGAAGAGTGTCCAGACTCGTTTGATTGTGGAAGTCTCGGCTCGTTTCACTTCCCTTTAACCACCGCAGAACGCCCTGATTGTGGTGCACTGGCCATCCATGGTTGCGATGATCATAAGCAACAGTCCCAGTACTTACTCATTGGAGGTGAAAAGTTTCCAGTTACACGGATTGGGAAGAAAAGTTTGTTCACTTCCAATCTTGTTTACGTTATTGACAATCATCTCTCCCAATATTTGGAATCAGGGAGCTGTAACGCCTTTACCCATAATATTACACTCCCTTCCGTCTCTCCTCTCATTGGTTTCTTCACTATCAGTAACAACGTTACTTTGTTCAAATGCAAGAGCAATCTCAACGTCAGCACGCCGCAAACTTACTTTAAAAATTCTACAAGCTGTGACTACGACATCGTTTTCGGCCCTCCTAATTCAGATGATGATGCATCTGTGTCCACGCACCCTTCCATTGCAGGATGCTCAAGTGTTGAGCTTCCCGCAGTGTATGGCCTTCCAATATCTGCAAACCCATTTGCGTTCTTAACTGCAGAAATTCCCATCCACTTCAATCCATCAGTTAAATGTGCCCAGTGTCGTCATGACACAAGGGTTCCGCATGGCCAATGTTTCCTTGACAGGGAAGGAAAACCTTACTGCGCTACAAGGAAGGACAAAAAAGGGACTCGGATGCTTGCACTCGCACTAGGTTTAGGTCTTGGACCTTGGATCATATTTGGGTTGATCCTCATTTTAAAAAACCACAAACGGAAGCAGAGTACCGCACACGTCCAACTCCAATCAACAATGGCTTCTGCTGATTCCAGCCATAGTCCTGATGTACAGACTGACAGGATCTTCTTTGGGGTGCCAATATACTCTTATAAGGAGCTTCAAGAAGCAACCAACAACTTTGACAACACCAGAAAACTCGGAGATGGAGGCTTTGGCACTGTTTACTATGGAAAACTTGAAGATGGAAGAGAAGTTGCAGTCAAACACCTATTTGATCACAACTACAGGAGAGTGGAGCAGTTTATGAATGAGATTGAGATCCTCACTCGAATGCGCCACAGAAATCTTGTGTCCCTGTATGGCTGCACTTCACGTCACAGCCGTGAGCTACTTCTTGTGTATGAATACATTCCAAATGGCACGGTTGCTTCTCATCTCCATGGTACTTTAGCAAGGGCCGGTTTACTCACTTGGCCTATTCGAATGCAAATCGCCATAGACACTGCTACTGCATTGGCATTTCTCCATATTTCAGATATCATCCACCGTGATGTCAAAACCAACAACATTCTACTTGACATTGATTTTTCAGTTAAGGTAGCAGACTTTGGTCTTTCAAGACTGTTTCCAAACAATGTCACCCATGTCTCCACGGCTCCACAAGGAAGTCCAGAATTGGCTTTCCAGTGTGTGCAAGTGGACAAAGAGCTAAGACCTTCTATGGATGGAGTTGTAAATGCACTCAAGAAAATTGGGAGTGCGAATTCTGAGCCTGAGCATGTAGAGAAAGGAGATGATAGTGCTGTGATCTCTCACAGCGAAGAATTAAATGGGTCGCAGGATTGGAATCAAGTTAGATTCTTAGTGAGAGAGAAGCTAAGGTCTTCACCAAACTCCTTGACTGAGAAATGGTCAAGTGAATCTACTACGCCTAATGCCAGTGCTTAA 1752 0.4441 MVLIYVLRFFLVSHLLLNWGVNGDREECPDSFDCGSLGSFHFPLTTAERPDCGALAIHGCDDHKQQSQYLLIGGEKFPVTRIGKKSLFTSNLVYVIDNHLSQYLESGSCNAFTHNITLPSVSPLIGFFTISNNVTLFKCKSNLNVSTPQTYFKNSTSCDYDIVFGPPNSDDDASVSTHPSIAGCSSVELPAVYGLPISANPFAFLTAEIPIHFNPSVKCAQCRHDTRVPHGQCFLDREGKPYCATRKDKKGTRMLALALGLGLGPWIIFGLILILKNHKRKQSTAHVQLQSTMASADSSHSPDVQTDRIFFGVPIYSYKELQEATNNFDNTRKLGDGGFGTVYYGKLEDGREVAVKHLFDHNYRRVEQFMNEIEILTRMRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGTLARAGLLTWPIRMQIAIDTATALAFLHISDIIHRDVKTNNILLDIDFSVKVADFGLSRLFPNNVTHVSTAPQGSPELAFQCVQVDKELRPSMDGVVNALKKIGSANSEPEHVEKGDDSAVISHSEELNGSQDWNQVRFLVREKLRSSPNSLTEKWSSESTTPNASA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03671 583 ProSiteProfiles Protein kinase domain profile. 328 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03671 583 Pfam Protein tyrosine and serine/threonine kinase 331 482 IPR001245 GO:0004672|GO:0006468
Aip09g03671 583 SMART serkin_6 328 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03671 583 MobiDBLite consensus disorder prediction 562 583 - -
Aip09g03671 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Aip09g03671 583 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 493 582 IPR044652 -
Aip09g03671 583 SUPERFAMILY Protein kinase-like (PK-like) 304 513 IPR011009 -
Aip09g03671 583 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Aip09g03671 583 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 10 492 - -
Aip09g03671 583 Gene3D Transferase(Phosphotransferase) domain 1 405 495 - -
Aip09g03671 583 Gene3D Phosphorylase Kinase; domain 1 300 404 - -
Aip09g03671 583 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 492 IPR044652 -
Aip09g03671 583 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 493 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03671 Aip-Chr9 143582579 143585315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03671 493 583 Receptor kinase-like Gene Family AT1G25390 38.462 4.29e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip09g03671 PK_Tyr_Ser-Thr 4.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03671 - - aip:107616167 1008.05