Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03666 ATGTACCGTTGTGTTATCATCAGCATCATCCTCTACTCTGTGTTGAGCAGAACCACTTTGTGCAGTTATGTGGATCCACAGTTTGAAGCATGTAAACCCCAAACATGCGGCAACCAATCCATAAGCTACCCTTTCTACATCCAATACAAGCAGGAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGATAGTAATGGCTTCCCAGTTCTCAATCTCTCTAATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTCGCCAATGCTGCCTTTTCATCAACCAACACCACCACAGCTGATTATTGTCTTTCCCTTACACGGAACCTCACCCTTCCCTCAACCAAGATCTTCAGTCTTGTTCATCAGAATCATAATAAGGACATCTTACTGTTCTTCGGCTGTAACCTGTCATCCCTGCCCACAGAGTTGACAAATTACAGAATTGGGTGTTCTGAAGCCAACAACAAAACGGGTGGTTCGATTCTGGCATTGTATAAGGACGATGTCAAAACAGTAAGCTCGGTGTCTAAGAGTTGCGGGAGGGGCGGAGAGGTGGTGCACGCGGGGGTGGAAGAGAGTGAAGCAGGAGGGATACAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGAATGCGAGTGATTGTAAGCCGTGCAGTAGCAGCGGAGGAAGGTGTGGCTTCAATGTAACTATGTATTTTTTCCAGTGTTACTGCACTGATAGAATTCATGCTTCCAGATGTGTTATTCCAGATGGTAGAAGCAAGGCTTCCATGAAGATTGGACTTGCACTCGGACTAGCTGCTGCAGTTATTCTGCTGTTAGTAATGGTCACCTACTACACAAGATGGAAGAAGGAAAACTCAAAACACCACCTGGTTGATGCCTTTTTGGAGAGACATGGACACCTTCAAATCAAGAGGTACAGCTATTCCGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGACGGACGACATGTAGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGATGATTTCATCAATGAAGTTGCTAGTATGAGCAGAACCTCTCACGTTAACATTATTGCTCTTCTTGGATTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCACTTGAGAAGTTAATCTATGAAGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAGACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAATATTTGCACAAGGGCTGCAATACTAGAATCTTGCATTTTGACATTAAGCCTCATAACATTCTATTAGATGAAAATTTCCTACCCAAAATTTCAGACTTTGGACTTGCAAAAATTTGCACAAGAAAAGAAAGTATAGTATCAATATTTGGTGCTAGAGGAACTGTAGGTTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGTAGTATCACATAAGTCAGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATCAAGGCTGAAGTTGATGCATCGAGTGAGATATATTTTCCTTATTGGATACACAATAGACTTGTATCAAATCAAGAGCTTGGTCTGCAAAATATAAGAAATGAATATGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAAGCCTTCAACTCGACCATCAATTAGTAAGGTGGTGGAAATGTTGGAAGGAAGAACTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAACTCTCCCTGA 1866 0.418 MYRCVIISIILYSVLSRTTLCSYVDPQFEACKPQTCGNQSISYPFYIQYKQEPFCGYPGFGISCDSNGFPVLNLSNTPYIIHQIFYHNQSLRVANAAFSSTNTTTADYCLSLTRNLTLPSTKIFSLVHQNHNKDILLFFGCNLSSLPTELTNYRIGCSEANNKTGGSILALYKDDVKTVSSVSKSCGRGGEVVHAGVEESEAGGIQEALRRGFMLNWNASDCKPCSSSGGRCGFNVTMYFFQCYCTDRIHASRCVIPDGRSKASMKIGLALGLAAAVILLLVMVTYYTRWKKENSKHHLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGDDFINEVASMSRTSHVNIIALLGFCFQGSKRALVYEFMPNGSLEKLIYEENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFLPKISDFGLAKICTRKESIVSIFGARGTVGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRKNIKAEVDASSEIYFPYWIHNRLVSNQELGLQNIRNEYDNEMVRKMTIVSLWCIQTKPSTRPSISKVVEMLEGRTELLQLPPKPYWFSPSNSP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03666 621 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Aip09g03666 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Aip09g03666 621 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Aip09g03666 621 ProSiteProfiles Protein kinase domain profile. 325 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03666 621 SMART serkin_6 325 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03666 621 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Aip09g03666 621 Pfam Protein kinase domain 328 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03666 621 Gene3D Phosphorylase Kinase; domain 1 302 399 - -
Aip09g03666 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 621 IPR045874 GO:0004672
Aip09g03666 621 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 621 - -
Aip09g03666 621 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Aip09g03666 621 Pfam Wall-associated receptor kinase C-terminal 180 247 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03666 Aip-Chr9 143506457 143509329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03666 24 612 Receptor kinase-like Gene Family AT5G38260 41.571 2.98e-148 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip09g03666 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03666 - - ahf:112712060 1199.88