Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03635 ATGACCGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCTAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGGTTAGGAGAATGCAAGCCTTTTCATGCTGTTAAAGTTGTTGTTGCTGCTATTCTTGTCCATGGTGGAGATCAAGAAGAAGAAGAAGCAACGAAGAAACATGCATAA 246 0.4593 MTGQFNSITAQGRTDPNQNTGISIHNATIRPADDLAPRVGVVKTYLGLGECKPFHAVKVVVAAILVHGGDQEEEEATKKHA 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03635 81 MobiDBLite consensus disorder prediction 1 24 - -
Aip09g03635 81 SUPERFAMILY Pectin lyase-like 2 48 IPR011050 -
Aip09g03635 81 PANTHER PECTINESTERASE 1 47 - -
Aip09g03635 81 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 47 - -
Aip09g03635 81 Pfam Pectinesterase 1 48 IPR000070 GO:0030599|GO:0042545
Aip09g03635 81 Gene3D - 1 63 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03635 Aip-Chr9 143172893 143173739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03635 1 47 Carbohydrate Esterase AT4G02330 76.596 1.28e-19 79.3