Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03597 ATGAGAAAGAAAGCACTAATGAAACTGCCACTATCTCTATTCAAAACCAAAGAGGAACCGCCACAAAGAAGAAAGCATCATCATCATCATAATGTTCTTCCATGGCAGAACTTGTTTCCATCTTGCGGCGGAAACTACCCGAACACACTCTCTTTTCGCGGCGGAGACGGCGGGGATTTCTTCAAGACGGTGAACTCTGTGTTCTTGGATCCTGCAGCTACAACCATTGAAGCAAGCATGACGGAGACACCATCAGCAGAATCATGGTTTTCATCGGAGTCGGCAAGCGCGGTGAGCTTGTCGACGGAGTCAGAGGAGTACGACGGCGAGTCTCTGGAGATGGTGGTGCGCGGCGTGAAGAGATCGGAGAGGCTGTTGTTCGAGGCAGGGGAGACAAAAACAAGCTCCATTTTGGAGATGGCGAAAGCAAGTAGTAGCTTGCCGTTCAAGGAAAGTGTGGTTGTGGCTATGGAGTCTGAAGATCCGTACAGTGATTTCAGGAGGTCAATGGAGGAGATGGTTGAGTGTCATGGAGTGAAGGATGATTGGGAGGGTTTGGAAGAGCTTCTTTGTTGGTATCTCAAGGTTAATGGTAAGAACAACCATGGATTCATTGTTGCTGCTTTTGTGGATTTGATTATCACCATTGCTGCTTCTGCTTCTGCTTCTGTTGCTGCAGCAGCTTCTTCTAATAACAACTCAACTTCTTCTTCTTCTTCCTGTTCTTCTTCTTCTTCATCTTCTGATTCTACAACTACTACTACTTATTCTTCTGCTGTTTCTTCTTTTCCTTCTTCTCCCTTGTGTTTATCTCAGGGACACAATGACATTGTTCATCATAAACACCATCATAATGATACTGCTACTACTAGTTAG 876 0.4543 MRKKALMKLPLSLFKTKEEPPQRRKHHHHHNVLPWQNLFPSCGGNYPNTLSFRGGDGGDFFKTVNSVFLDPAATTIEASMTETPSAESWFSSESASAVSLSTESEEYDGESLEMVVRGVKRSERLLFEAGETKTSSILEMAKASSSLPFKESVVVAMESEDPYSDFRRSMEEMVECHGVKDDWEGLEELLCWYLKVNGKNNHGFIVAAFVDLIITIAASASASVAAAASSNNNSTSSSSSCSSSSSSSDSTTTTTYSSAVSSFPSSPLCLSQGHNDIVHHKHHHNDTATTS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03597 291 PANTHER TRANSCRIPTION REPRESSOR OFP13 7 246 - -
Aip09g03597 291 ProSiteProfiles OVATE domain profile. 155 215 IPR006458 -
Aip09g03597 291 Pfam Transcriptional repressor, ovate 159 216 IPR006458 -
Aip09g03597 291 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 246 IPR038933 GO:0045892
Aip09g03597 291 MobiDBLite consensus disorder prediction 229 265 - -
Aip09g03597 291 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 153 216 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03597 Aip-Chr9 142664720 142665796 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip09g03597 Ovate 5.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03597 - - gmx:102668773 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02092 06 92308444 92309494 Aip09g03597 09 142664720 142665796 ECH
Aip02g03187 02 108707811 108708689 Aip09g03597 09 142664720 142665796 ECH
Aip09g03597 09 142664720 142665796 Aip09g03597 09 142664720 142665796 ECH