Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03576 ATGGACACTTCAAACCCCGCTGTGTTTGTAAATGGCGAGTTGCTTCCAAAGTTCATAGGAAAGAAAGTACGAACGGTGGTTCAGGTGAATAAATGTGATGGTGTGGTCACTGCAGCAAAATCCACAGATGATCAAGAACTAACTGTGAATGGTTTGCCACAAGTCCCTCTTATGAATTTTGTTGAAGTAATTGGTATTGCGGAAACTAATCACTCCATCAATGCTGAAATCTGGACTGACTTTGGCGCCACTTTTGATACCAATTCTTACAATCAGTTATGCCAACTAGCAAATGGAGAATTCAGAAATCTGTTTCTCTAG 321 0.405 MDTSNPAVFVNGELLPKFIGKKVRTVVQVNKCDGVVTAAKSTDDQELTVNGLPQVPLMNFVEVIGIAETNHSINAEIWTDFGATFDTNSYNQLCQLANGEFRNLFL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03576 106 Gene3D - 2 106 IPR012340 -
Aip09g03576 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Aip09g03576 106 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 106 - -
Aip09g03576 106 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Aip09g03576 106 CDD RPA3 6 105 - -
Aip09g03576 106 Pfam Replication factor A protein 3 1 99 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03576 Aip-Chr9 142499446 142500894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03576 1 106 Core DNA Replication Machinery Family AT4G18590 59.434 1.90e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03576 K10740 - gmx:100781484 178.333