Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03527 ATGTTATCGGAGTTGATGAGCTTTCTGAGGGCCTGCTTTCGGCCGAGTTCGGAAGGATACACGCGTGGAGGTGCTGATGCTGGAGGCAGACAGGATGGACTATTGTGGTACAAAGACTTGGGGCAGCAGTCGAATGGTGAATTTTCGATGGCGGTAGTACAAGCCAATAACCTGCTGGAGGATCAGAGTCAGCTTGAATCAGGAACTTTGAGCTCCAATGAGTCTGGCCCTTATGGTACCTTTGTTGGCGTCTATGATGGTCATGGAGGGCCCGAGACATCACGATTTATCAATAATCACCTGTTTCACCATCTCAAGAGATTTACAGCAGAGCAACAATCGATGTCACCAGATGTAATTCGCAAGGCATTCCAGGCAACAGAAGAGGGATTTGTGTCACTTGTTGCCAGACAGTGGCCATTGAACCCACAAATAGCAGCTGTCGGTTCATGCTGTCTAGTTGGTGTTATTTGTAATGGAACCCTTTATGTAGCGAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGTGAGGTTTTGGCCATGCAGTTATCATCAGAACACAATGCATCTATAGAGTCTGTAAGACAGGAGCTGCAATCTTTGCACCCCGATGATTCGAATATCGTTGTTTTAAAGCATAATGTATGGCGCGTGAAGGGCCTCATTCAAGTTTCGAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCTCTATATGCTAAGTTTCGACTCCGTGATCCAATCAAGAGGCCAATTCTGAGCTCAGAACCATCAATATCTGTGCATCAATTGCTTCCACAAGATCAGTTTGTGATATTCGCATCGGATGGTCTCTGGGAGCACCTTAGCAATCAGGAAGCAGTTGATATAGTTCAAAATAATCCCCGCAATGGAATTGCAAGGAGGCTGGTCAAAACTGCGCTACAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCGGACTTAAAGAAGATCGACCGTGGAGTTCGCCGGCATTTCCACGACGATATCACCGTGATTGTTGTCTACCTGGATTCGAATCTCGCTAGTAGGGCAAGCGCCGGCAAGTTTCCTAGTGTTTCTATCAGAGGGGGTGGAATTAACTTGCCCCCTAACACACTGGCACCTTGTACTACACCAACAGAGAATGGTGGTGCCTGA 1194 0.4631 MLSELMSFLRACFRPSSEGYTRGGADAGGRQDGLLWYKDLGQQSNGEFSMAVVQANNLLEDQSQLESGTLSSNESGPYGTFVGVYDGHGGPETSRFINNHLFHHLKRFTAEQQSMSPDVIRKAFQATEEGFVSLVARQWPLNPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRVVKATGEVLAMQLSSEHNASIESVRQELQSLHPDDSNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLRDPIKRPILSSEPSISVHQLLPQDQFVIFASDGLWEHLSNQEAVDIVQNNPRNGIARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSNLASRASAGKFPSVSIRGGGINLPPNTLAPCTTPTENGGA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03527 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Aip09g03527 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Aip09g03527 397 Gene3D - 37 365 IPR036457 -
Aip09g03527 397 ProSiteProfiles PPM-type phosphatase domain profile. 55 355 IPR001932 -
Aip09g03527 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Aip09g03527 397 CDD PP2Cc 48 355 IPR001932 -
Aip09g03527 397 Pfam Protein phosphatase 2C 72 324 IPR001932 -
Aip09g03527 397 SUPERFAMILY PP2C-like 57 356 IPR036457 -
Aip09g03527 397 SMART PP2C_4 41 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03527 Aip-Chr9 141934531 141936586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03527 1 397 PP2C-type Phosphatase Gene Family AT4G38520 75.567 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03527 - - gmx:100794801 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03527 09 141934531 141936586 Aip09g03527 09 141934531 141936586 ECH