Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03504 ATGCGTGGTGTTGAATGCAGGTACGCGCTGGATGTGAATATTGAGAGAGCCGCGGATGTTCTTATGCACAAGAGATTGCTGCATTTGGCTCACGATCCTGTTAATAGGCCTGCAATTGAAGTTCGCTTAGTACAGGTTCCGCCTGTAACTGATGCAAACTCAGCTTATACTGTCCAGTCGGATGCAATTGAAAATGAATCAGATCAAAGCTCCCCAAAGTACTCTAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAATGGATGAGGAACATTCTGTACATGCCAGTGCACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACTGATGACAAACCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCCCATGCCTTTTCCACAACTGATGGCTACTCGTTAGATGTGTTTGTTGTTGATGGATGGCCCTATGATGAAACAGAGAAGCTTAAAACAGCGTTGGAAAAAGAGGTCATAAAGATTGAGAGGAGGTCAACGTCGAGTAGGCAATCAGTATCTTCTGTTGGCGAAGATGAAGAAGCAAGGATGAAAAGTGAATCTGATCAGTTGAATATACCTAACGATGGGACAGATGTTTGGGAGATAGATCCCAAGCATTTGAAAATTGGAACTCAAATTGCGTCTGGGTCATATGGTGAACTATTTAAAGGTATATATTGTAGCCAGGAAGTAGCCATTAAAATTCTCAAGCCTGAGCATGTAAATTCAGATTTGCAGAGAGAGTTTGTGCAGGAAGTGTACATCATGAGAAAGGTTCGACACAAAAATGTTGTACAATTTATAGGAGCTTGTACCAAGCCCCCACGCTTATGCATAGTTACAGAATTTATGTCCGGTGGTAGTGTGTATGACTACTTACATAAGCGGAAGGGTAGTTTTAAATTTCCTACCTTGCTCAAAGTTGCAATTGATGTTGCTAAAGGAATGAACTACTTGCACCAGCATGAGATAATCCATAGAGATTTGAAAGCTGCCAATCTTTTGATGGATGAAAATGGTATTGTAAAAGTTGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAGTCAGGAGTTATGACAGCAGAAACTGGAACGTATCGGTGGATGGCTCCAGAAGTTATAGAACACAAGCCGTACGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTTACTGGAAAGCTTCCCTACGAATATTTGACGCCTCTACAAGCAGCAATAGGAGTGGTTCAAAAGGGTTTACGACCAACCATCCCCAAGAACACACATCCAAATTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCTACATTGAGACCCGATTTTGCAGAAATCATTGAGATCTTGCAGCAGTTAGCTAAGGAGGTTGGGGATGAAGGAGAGGAGCGGCGCAAGGATAAAACGGGAGGATTTCTGTCTGTTCTTAGAAGAGGTCATCACTGA 1536 0.4258 MRGVECRYALDVNIERAADVLMHKRLLHLAHDPVNRPAIEVRLVQVPPVTDANSAYTVQSDAIENESDQSSPKYSSRQSIHPPPAFGSSPNLEALALEEMDEEHSVHASAQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYDETEKLKTALEKEVIKIERRSTSSRQSVSSVGEDEEARMKSESDQLNIPNDGTDVWEIDPKHLKIGTQIASGSYGELFKGIYCSQEVAIKILKPEHVNSDLQREFVQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKRKGSFKFPTLLKVAIDVAKGMNYLHQHEIIHRDLKAANLLMDENGIVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPNFVELLERSWQQDPTLRPDFAEIIEILQQLAKEVGDEGEERRKDKTGGFLSVLRRGHH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03504 511 CDD ACT_TyrKc 116 182 - -
Aip09g03504 511 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 498 - -
Aip09g03504 511 Gene3D Phosphorylase Kinase; domain 1 221 309 - -
Aip09g03504 511 MobiDBLite consensus disorder prediction 60 85 - -
Aip09g03504 511 Gene3D - 116 188 - -
Aip09g03504 511 MobiDBLite consensus disorder prediction 60 90 - -
Aip09g03504 511 PRINTS Tyrosine kinase catalytic domain signature 305 318 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 PRINTS Tyrosine kinase catalytic domain signature 342 360 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 PRINTS Tyrosine kinase catalytic domain signature 407 429 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 PRINTS Tyrosine kinase catalytic domain signature 388 398 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 PRINTS Tyrosine kinase catalytic domain signature 451 473 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 MobiDBLite consensus disorder prediction 191 219 - -
Aip09g03504 511 SUPERFAMILY Protein kinase-like (PK-like) 217 480 IPR011009 -
Aip09g03504 511 SMART serkin_6 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03504 511 CDD STKc_MAP3K-like 237 480 - -
Aip09g03504 511 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 498 - -
Aip09g03504 511 ProSiteProfiles Protein kinase domain profile. 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03504 511 Gene3D Transferase(Phosphotransferase) domain 1 310 501 - -
Aip09g03504 511 SUPERFAMILY ACT-like 116 180 IPR045865 -
Aip09g03504 511 Pfam Protein tyrosine and serine/threonine kinase 231 480 IPR001245 GO:0004672|GO:0006468
Aip09g03504 511 Coils Coil 168 188 - -
Aip09g03504 511 ProSiteProfiles ACT domain profile. 118 192 IPR002912 -
Aip09g03504 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03504 Aip-Chr9 141741058 141747581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03504 7 510 MAP Kinase Kinase Kinase AT4G35780 67.188 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip09g03504 PK_Tyr_Ser-Thr 2.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03504 - - gmx:100805180 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03504 09 141741058 141747581 Aip09g03504 09 141741058 141747581 ECH