Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03498 ATGGAGCCTCCACTCCTACCGAAGAAGCCCCTTTCCGATAAAGTTCCGAACTTTGATGCCAACAAACAAGGTGACTCTGCTCACCACCACCCGACAAGCGCGGTCACTGAGGACCAGGTCGATGAAGGCGTGGAAGGTGTGACTATGGATGAAAAGGAGCAGCTTTTGAACAGTGGTGATAATGGGCTTGAAGATTCCTCTTGTGTTCAAGAAGTTAGTGTTGTTGGAAAGAAGCGCAAAAGAAAATCTAAAAAGGAGATGCTGGAGGCCTTGGAGATCGAGAAGAAGAAGAAAGGTGATGATGATTCCGCTGCTATGACTGTGAAAATGCGTGAAAGAACAAGCGTTCCAAGTTATGCTGAGAATCTCAAAGAATATGATGATGATGAGGGTCTTGGTGAGAAGAAGAGACGTGGCAGAAAACCGAAGAACCAGAAGAAGGAAGAACGCCCTAGTAATGAAAATGATGTTCCAGATGCTGAAAATGAGTCAAAATCTGGGAAAAGGAAGTTAGAAGATCGGAACCCCAGTGATTCTGCAAATGGCAATGTTCAGGAGAAGATTCCTGGAAGGAAAAGAAAGAACTTGGATGGTGAGTTAAAGTGTGAAAATGAAAAGATGGAAAATGAGGAGTTGGGGTCTCATTCCAATGCTCAAATTGATGCTGAGACGACTTTAGATTCCTTGGAAAAAGGTGACAATCAGCGTAGATACGGTTTAAGGACGAATCGTGTGGTCAAAATGCAACAAGAGGAGCCAAAAGTCAGGAGAGACCAAAAATTCGTTGAAGAGGAGAGCTTAATGTGCCATCAATGTCAGAGGAATGATAAAGGTGGTGTAGTGAGGTGCGCTAGATGCAAGACGAAAAGATATTGCATGCCCTGTATAGAAAATTGGTATCCCAATATGAAGCCAGATGAATTTACTCTCTGTCCTGTATGCCGAGGCAATTGTAATTGCAAAGCATGTTTGCGATCTACTGATCTTATTAAGGAAATGAAGATGAGGAAAAATACCAACAACCATAAACAAGTTGATTTCTCTTTGTATTTGCTAAAAGGCGTTCTTCCATATATAAAACAGTTGGATAAAGAACAAATTGCTGAGAAAGAGTTCGAAGCTAAAAGACAAGGGCTTTCATCCTTGGAGCTAAAAATTGAAAAGGCAGATTTTCAACCAAACGAACGTGTCTACTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTGAAACGTGCTCTTTTGACCTGTGTCTCAGCTGTTGCCATGAATTTCGTAATGGGCAGCTTTTAGGTGGTCCAGATCCAATTGGGTTTGGGTTTGTCAACCGGGGAATCGGATATCTGCATGGTGAACCAAAACCAGAAGTAAAGGGAAAATCCAATGGATCACAGGTTCAGACTCAGGAATCACAGGCTATTCCTGTACCACGTGGGTGGTCAAGGGATGGGTGGCATGCAGAGAGTGATGGCAGCATACCCTGCCCAAAAGTCACTGAGGAGTGCTGCGGCAGATCTCTGGAGCTGAGAAGTGTATTTGGTCCAAATTTTATCTCTGAGTTAGTACACAAAGCAGATGAGCTAGCAGAAGCATATAAGCTTGACAATTCAGTTGAGATTCCTGATAGCTGGTGCTCATGTTCGACGTTGAGAAACACTGTTGATAAAAATAAAAATACAAGGAAGGCAGCTTCCCGTGAAGATTCCAGTGACAACTTTTTATACTGCCCGTCAGCTTTAGATCTACAACAGCATGATGATGTAAAACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTGATTGTCAGCAATGTGCTCGATTGTTCATCAGGTTTGAGCTGGGAACCACTTGTCATGTGGCGTGCATGTCGTCAGATAACTAACACCAAGCATGGTATACATTTGGAGGTCGAAGCAATTGATTGCTTGGATTGGTGCGAGGCAGATGTTAATATCCATCAATTCTTTACTGGGTATTCAAGCGGACGTAAAGATTGGTGTAACTGGCCTCAGATACTGAAATTAAAAGATTGGCCACCTTCTAATTTATTTGAGGAACGTTTACCGCGTCACTGTGCTGAGTTTATATCATCCTTGCCCTACAAGGATTATACAGATCCTCTTATTGGTGCTCTTAATCTTGCTGTGAAGTTGCCGAAGGAAAGTATAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCGGAAGAGCTTGGGCGTGGGGATTCTGTGACTAAGCTCCACTGCGATATGTCTGATGCAGTAAATGTGCTAACTCACATTGCTGAAGTGAAATTGGATTCTAACACACGTGAAGCGATTGAGACATACAAAGCAAAGCACCTAAAGCAGGACCAGAGGGAATTGTATGGAGTTCATGAGGGAGAAACTACTGATGACACGCATAATGATTCATGTTCAGCCATAAATGCTTCTGACAAGCAAAATGGCTCTAAAGTTGTGGAAAATGAAAGTGGACTATGTGACATGAAAGTGGATGAACAGTTTCATCAAGCTTCTGGTAATGAGAGTGCAGCTGTAAATATGGATGGTCTTTGTCGCGGGTCAGAGTTGAAAGAGGCTGAAAAAGCGGAAGAACAAGAAAAAAGTATGTCAGGTGCCTTTGATGGTGCTCTCTGGGATATTTTTCGAAGAGAGGATATTCCTAAATTGCAGGAATATCTGAAAAATCATTTTAGAGAGTTTAGACATGTGTATTGCAGTCCTTTGACACAGGTCATTCATCCCATCCATGATCAGACCATGTATTTGACTGAGTATCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTCGTTCAGAGGTTAGGAGAAGCTGTTTTCATTCCAGCAGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCCCTTGATTTTGTATCTCCTGAAAATCTTGGTGAGTGCTTCCGATTGACAGAGGAATTCCGCACACTCCCAATAAATCACAGGTCTTCTGAGGACAAGTTGGAGGTATAG 3042 0.427 MEPPLLPKKPLSDKVPNFDANKQGDSAHHHPTSAVTEDQVDEGVEGVTMDEKEQLLNSGDNGLEDSSCVQEVSVVGKKRKRKSKKEMLEALEIEKKKKGDDDSAAMTVKMRERTSVPSYAENLKEYDDDEGLGEKKRRGRKPKNQKKEERPSNENDVPDAENESKSGKRKLEDRNPSDSANGNVQEKIPGRKRKNLDGELKCENEKMENEELGSHSNAQIDAETTLDSLEKGDNQRRYGLRTNRVVKMQQEEPKVRRDQKFVEEESLMCHQCQRNDKGGVVRCARCKTKRYCMPCIENWYPNMKPDEFTLCPVCRGNCNCKACLRSTDLIKEMKMRKNTNNHKQVDFSLYLLKGVLPYIKQLDKEQIAEKEFEAKRQGLSSLELKIEKADFQPNERVYCDNCKTSIFDYHRSCETCSFDLCLSCCHEFRNGQLLGGPDPIGFGFVNRGIGYLHGEPKPEVKGKSNGSQVQTQESQAIPVPRGWSRDGWHAESDGSIPCPKVTEECCGRSLELRSVFGPNFISELVHKADELAEAYKLDNSVEIPDSWCSCSTLRNTVDKNKNTRKAASREDSSDNFLYCPSALDLQQHDDVKHFQWHWSKGEPVIVSNVLDCSSGLSWEPLVMWRACRQITNTKHGIHLEVEAIDCLDWCEADVNIHQFFTGYSSGRKDWCNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKDYTDPLIGALNLAVKLPKESIKPDMGPKTYIAYGFPEELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSNTREAIETYKAKHLKQDQRELYGVHEGETTDDTHNDSCSAINASDKQNGSKVVENESGLCDMKVDEQFHQASGNESAAVNMDGLCRGSELKEAEKAEEQEKSMSGAFDGALWDIFRREDIPKLQEYLKNHFREFRHVYCSPLTQVIHPIHDQTMYLTEYHKRKLKEEYGIEPWTFVQRLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENLGECFRLTEEFRTLPINHRSSEDKLEV 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03498 1013 MobiDBLite consensus disorder prediction 92 199 - -
Aip09g03498 1013 SMART cupin_9 692 998 IPR003347 -
Aip09g03498 1013 ProSiteProfiles Zinc finger RING-type profile. 269 315 IPR001841 -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 122 137 - -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 92 108 - -
Aip09g03498 1013 Pfam JmjC domain, hydroxylase 885 981 IPR003347 -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 802 825 - -
Aip09g03498 1013 SUPERFAMILY Clavaminate synthase-like 590 1011 - -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 463 478 - -
Aip09g03498 1013 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 89 1013 IPR045109 GO:0032454|GO:0033169
Aip09g03498 1013 MobiDBLite consensus disorder prediction 1 41 - -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 459 482 - -
Aip09g03498 1013 Gene3D Cupin 579 1007 - -
Aip09g03498 1013 PANTHER - 89 1013 - -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 809 825 - -
Aip09g03498 1013 ProSiteProfiles JmjC domain profile. 711 998 IPR003347 -
Aip09g03498 1013 MobiDBLite consensus disorder prediction 145 176 - -
Aip09g03498 1013 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 264 331 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03498 Aip-Chr9 141637125 141644233 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip09g03498 JmjC 1.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03498 K15601 - gmx:100780803 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03498 09 141637125 141644233 Aip09g03498 09 141637125 141644233 ECH