Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03483 ATGTCTAGAACATCCAGTGTCCCACCTGCCTTCCAATCTATCAAGTCATTGCCTCCCGACTTCAAAGTTGCCAATAATCTGAACGGTGGTCTTTCAAGCAAGAATGGAGATGTTAGATTGAGAAGCGGTGATCCAGTTCGATCAAGTAGTCCTGCAAATGGTGCACTAGTAGTGGAGGTTTCTAAGGAAGTTCACAACTGTGCTAGCAACATGGATGTTTTCGATGAGGATTCGCCTTATAGTGGACAGGTTAGGTTGTTAGAAGAAGACAGGCCATCAAATGGGGATGAAGACTCAGAATCTGTTCCTTTGCCCCTCTCCTCAAATTCTACATCCACTAGAGAAAGCAGGTGGTGTGATACAACTCCTTATGCTTCAAAGAAGAAGGTTCAGTGTTGGCTTCAACTTTCAAATGGGAATTGGGAGCTAGTGAAGATAATAAGATCTTCTGGAACTGAGTCTGTTGTTTCACTGCCTGATGGGAAAGTTTTAAAGGTACACGATGAAAGCTTAGTATCAGCAAACCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCTTCAGTCTTATACAACTTACAATATAGATACAACCAGAATATGATCTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTCAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAAGAATTGAAAGCCCTCATGTGTATGCCATTACTGACACAGCCATCCGAGAAATGATACGGGATGAAGTAAATCAATCTATAATTATAAGTGGCGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTAGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCTTTTGGTAATGGAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATGTGGTGCTAATATCCAAACATTTCTTCTGGAAAAGTCTAGAGTTGTCCAATGCAATGAAGGTGAAAGGTCCTATCATATATTTTATCAGCTATGTGCTGGGGCGCCACCATCTCTAAGGGAGAAGCTAAATCTAAGAAGTGCTGAAGAATACAAATATCTTAGGCAGAGCAATTGTTACTCAATTGTTGGTGTTAATGATGCAGAAGAATTTCGCATAGTCGTGGAAGCACTGGATGTTGTCCATATTAGCAAAGAAGACCAGGAGAGTGTATTTGCAATGCTTGCTGCGGTATTATGGTTAGGAAATGTATCGTTTACAGTGATTGATAATGAAAATCATGTTCAAGCTGTTGAAGATGAGGGGCTGTTCAGCGTTGCCAAGTTGATTGGCTGTGACATTGAAGATCTCAAGTTTACATTAACAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGAAACTTTCTCAGGCTATTGATGCAAGAGATGCTTTGGCGAAGTCAATATATTCCTGTTTGTTTGATTGGATAGTTGAACAAATAAACAAATCTCTTGCTGTTGGTAAAAGACGCACAGGCAGATCAATAAGTATTCTAGATATCTATGGCTTTGAATCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTACAGCAACACTTCAATCGTCATTTGTTTAAGTTAGAACAAGAGGAATATATACAAGATGGGATTGATTGGGCTAAAGTTGAATTTGAAGATAACCAAGATTGCCTTAATCTTTTTGAAAAGAAACCATTGGGCTTACTATCCCTGTTGGATGAAGAGTCCACATTCCCAAATGGCACAGATTTAACATTTGCCAACAAGCTTAAGCAACATTTGAATTCTAATTCTTGTTTCAAAGGAGAACGAGACAAGGCCTTTACCGTATGTCATTATGCAGGGGAGGTAATTTATGATACAACTGGATTCCTGGAGAAGAACAGAGACTTGTTGCACTTGGATTCCATCCAACTTCTCTCCTCAAGTACATGTCATCTTCCTCAGAAATTTGCGACCCAAATGCTTACTCAGACTGAGAAGCCTGCAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAACTATTCCAACTGATGCAACGTTTAGAGAGCACTACACCACATTTTATCCGCTGCATTAAACCTAATAACCTCCAATCACCTGGATTATACGAGCAAGGCCTCGTACTGCAGCAGCTGAGATGTTGTGGGGTCCTGGAAGTAGTTCGAATATCTAGATCAGGCTTTCCCACTAGAATGTCCCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAAGATCCACTTAGCGTTTCTGTTGCAATTCTTCATCAGTTTAACATTTTGCCAGAAATGTATCAAGTTGGTTACACAAAACTATTTTTCAGAACAGGACAGGTTGGAGTGCTTGAAGATACTAGAAATCGTACGCTCCATGGAATTTTGCGTGTGCAAAGTTGCTTCAGGGGTTACCAAGCTCGTTTGTACCGCAAAAATCTTTGGAGATCAATCACTACTCTTCAATCATTTATTAGGGGAGAGAAAAGCAGAAAGGAATATGCAGCTTCAGTGCACAGACATAGAGCTGCTGTGGTTATACAAAAGAAGACGAAAACAATATTGGCGAGAAACAGATTGAAGACTACCATTGATGCTGCAGTTGTCATACAATCATTTATCCGTGGTTGGTTAGTCAGAAGATGCTCAGGGGATCTAAGTTTACTGAAATCTGGAGGCACAAAGACTAATGAGTCAGATGAGGTTCTGGTGAAGTCATCTTTCCTAGCTGAATTACAACGCCGGGTACTTAAAGCTGAAGCTGCCCTCAGAGAGAAAGAAGAGGAAAATGACATCCTACAACAACGTCTTCAACAGTATGATAACAGATGGTCTGAATATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTATCCATTGCAAAGAAGAGTCTTGCTATGGATGATTCTGAAAGGAATTCAGATGCATCTGTTAATGCAAGTGATGACAGGGATTATAGCTGGGATATGGGAGGTAATCATAGGCGCCAAGAAAGCAATGGAACAAGATCAATGAGTGCTGGTTTAAGTGTTATAAGCCGGTTGGCTGAAGAATTCGAGCAGAGGAGTCAAGTTTTTGGTGATGATGCAAAGTTCTTGGTTGAAGTAAAATCTGGCCAAGTTGAAGCCAGTTTGAACCCAGACAAAGAACTTAGGAGATTAAAGCAGATGTTTGAAGCTTGGAAGAAGGATTATGGAGCAAGACTGAGGGAAACAAAGGTCATTTTGAATAAGCTTGGAAGTGAAGATGGGTCAATTGAGAAAGCCAAGAAGAAATGGTGGGGAAGAAGGAATAGCACAAGGATGAATTGA 3534 0.4015 MSRTSSVPPAFQSIKSLPPDFKVANNLNGGLSSKNGDVRLRSGDPVRSSSPANGALVVEVSKEVHNCASNMDVFDEDSPYSGQVRLLEEDRPSNGDEDSESVPLPLSSNSTSTRESRWCDTTPYASKKKVQCWLQLSNGNWELVKIIRSSGTESVVSLPDGKVLKVHDESLVSANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKRIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKICGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLRSAEEYKYLRQSNCYSIVGVNDAEEFRIVVEALDVVHISKEDQESVFAMLAAVLWLGNVSFTVIDNENHVQAVEDEGLFSVAKLIGCDIEDLKFTLTTRKMKVGNDNIVQKLKLSQAIDARDALAKSIYSCLFDWIVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDKAFTVCHYAGEVIYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQKFATQMLTQTEKPAVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQVGVLEDTRNRTLHGILRVQSCFRGYQARLYRKNLWRSITTLQSFIRGEKSRKEYAASVHRHRAAVVIQKKTKTILARNRLKTTIDAAVVIQSFIRGWLVRRCSGDLSLLKSGGTKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILQQRLQQYDNRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDRDYSWDMGGNHRRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDKELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDGSIEKAKKKWWGRRNSTRMN 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03483 1177 Pfam IQ calmodulin-binding motif 928 944 IPR000048 GO:0005515
Aip09g03483 1177 Pfam IQ calmodulin-binding motif 879 897 IPR000048 GO:0005515
Aip09g03483 1177 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 PRINTS Myosin heavy chain signature 306 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 PRINTS Myosin heavy chain signature 538 566 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 PRINTS Myosin heavy chain signature 591 619 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 Gene3D - 856 904 - -
Aip09g03483 1177 Gene3D - 905 949 - -
Aip09g03483 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1177 - -
Aip09g03483 1177 ProSiteProfiles Myosin motor domain profile. 180 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 ProSiteProfiles IQ motif profile. 928 955 IPR000048 GO:0005515
Aip09g03483 1177 Gene3D Kinesin motor domain 183 781 IPR036961 -
Aip09g03483 1177 Gene3D - 785 853 - -
Aip09g03483 1177 Coils Coil 972 1013 - -
Aip09g03483 1177 Gene3D - 548 742 - -
Aip09g03483 1177 MobiDBLite consensus disorder prediction 1039 1053 - -
Aip09g03483 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 423 720 - -
Aip09g03483 1177 ProSiteProfiles IQ motif profile. 879 906 IPR000048 GO:0005515
Aip09g03483 1177 SMART iq_5 925 947 IPR000048 GO:0005515
Aip09g03483 1177 SMART iq_5 902 924 IPR000048 GO:0005515
Aip09g03483 1177 SMART iq_5 853 875 IPR000048 GO:0005515
Aip09g03483 1177 SMART iq_5 876 898 IPR000048 GO:0005515
Aip09g03483 1177 MobiDBLite consensus disorder prediction 100 117 - -
Aip09g03483 1177 Gene3D - 362 421 - -
Aip09g03483 1177 PANTHER MYOSIN 9 1177 - -
Aip09g03483 1177 Pfam Myosin head (motor domain) 182 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 MobiDBLite consensus disorder prediction 89 117 - -
Aip09g03483 1177 MobiDBLite consensus disorder prediction 1039 1079 - -
Aip09g03483 1177 MobiDBLite consensus disorder prediction 25 53 - -
Aip09g03483 1177 CDD MYSc_Myo8 194 840 IPR036022 -
Aip09g03483 1177 ProSiteProfiles IQ motif profile. 856 883 IPR000048 GO:0005515
Aip09g03483 1177 SMART MYSc_2a 174 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip09g03483 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 898 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03483 Aip-Chr9 141518444 141528199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03483 7 1175 Myosins gene family AT1G50360 75.212 0.0 1800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03483 - - gmx:100782618 2031.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03483 09 141518444 141528199 Aip09g03483 09 141518444 141528199 ECH