Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03466 ATGCCAAATCCAAGCACCATGTTAACTACTGTTACTGTTACTGTTACTGTTACTCATCGCGCCGCCCCGCCCCGCCCCTTGTTCCTCCACAATGCGGGGAAACCTTCTCGGAACCACCGACAAGCGGCCGAAACCCCTGTCTCCAAcgaaggcgccacccatccttccgggcgagATTACTTGAATGGTGATGGTAATACATGCTCTGCTCCTGGTTGTAAAGCAGCACTTGCAAAAGATGGTGTTTTCTCCAAGGCTACGTTGAGGAGTTGCTTGTCTGATGAACTTGGTGGTAGTAATTCCATAAAAGTGCATGATTTTGCTCGTTCACTAGCAGCAGAGAGACTTGATGGGATGATGTCTCTGAGTGCTAGAGACAGATCTGTTAAAGATTTTAATTCTGATTCCAAGGTAACTGTTATGCTGATGTCGCTGAAAGCAGGAAATCTTGGTTTGAATATGGTTGCTTTGAAGACAGAATACTGGTTCTTCAGGAAGAGGAGGAAAATGGTTGCATCCACTTTTGGCGAAGACAATGCCGACAATTCCGACGCTCGCCTTTCAGTGGATGATTTCTGA 579 0.4352 MPNPSTMLTTVTVTVTVTHRAAPPRPLFLHNAGKPSRNHRQAAETPVSNEGATHPSGRDYLNGDGNTCSAPGCKAALAKDGVFSKATLRSCLSDELGGSNSIKVHDFARSLAAERLDGMMSLSARDRSVKDFNSDSKVTVMLMSLKAGNLGLNMVALKTEYWFFRKRRKMVASTFGEDNADNSDARLSVDDF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03466 192 PANTHER HELICASE-LIKE TRANSCRIPTION FACTOR CHR28 112 156 - -
Aip09g03466 192 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 59 99 - -
Aip09g03466 192 Gene3D - 84 163 IPR027417 -
Aip09g03466 192 PANTHER HELICASE-LIKE TRANSCRIPTION FACTOR CHR28 59 99 - -
Aip09g03466 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 158 IPR027417 -
Aip09g03466 192 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 112 156 - -
Aip09g03466 192 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03466 Aip-Chr9 141370697 141375103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03466 111 192 RAD5 or RAD16-like Gene Family AT1G61140 35.200 5.80e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03466 - - aip:110266389 116.701