Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03444 ATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGATGTTTGTGAAGGTTATGACTGATGAACAGTTAGAAACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGTGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTACAGGAGTTCGGGTGGGAAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAGAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGGATATTTGATCAAGGAAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATCACTGCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACCTACTACTATTGAATCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGGTTCCCAACAACAACAACATAGTACCATCATAATGACTAATGCTTCTGCTACTAATAGGCCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTAAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGATCGTCGTTAAAAAAATCGGTGCTCGGTGGAGAGGAGAAGACACTGTTTACAGCGCCGGAAAAAAGTCGGTGTTCGGTGGAGAGGAGGAGGCACTGTTTACAGCGCCGGAGACAAAAGCAAGAACGTCGGAGGTCGCAGTCGCAGTTACTGATGGGGAGGAAGAGAGGAAAGGACAGAGCGGGAACGGCTGGTTTCCTGAAAACGTGGTCGGGGACGTAGCGGCGGCGGTCGTTGGGATCTCAGCGTTACGGGGGATAAGAGAGAAGTGA 1068 0.441 MIEWQKQLQNNEKADRTNNNMMFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLTGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITAELSHHGQISETNVYNWFQNRRARSKRKLQNNVPPTTIESEVDAEVDSKDKKTRPEELIGSQQQQHSTIIMTNASATNRPEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMIVVKKIGARWRGEDTVYSAGKKSVFGGEEEALFTAPETKARTSEVAVAVTDGEEERKGQSGNGWFPENVVGDVAAAVVGISALRGIREK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03444 355 CDD homeodomain 86 147 IPR001356 GO:0003677
Aip09g03444 355 SMART HOX_1 84 151 IPR001356 GO:0003677
Aip09g03444 355 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
Aip09g03444 355 MobiDBLite consensus disorder prediction 145 185 - -
Aip09g03444 355 Gene3D - 87 152 - -
Aip09g03444 355 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Aip09g03444 355 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 263 IPR044559 GO:0003700
Aip09g03444 355 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Aip09g03444 355 PANTHER - 2 263 - -
Aip09g03444 355 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03444 Aip-Chr9 141075216 141080154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03444 1 261 Wox Gene Family AT4G35550 48.746 1.77e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip09g03444 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03444 - - ahf:112777216 542.347