Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03434 ATGGCAGTGTATAGAATTGCAATTGGATCACCAAGGGAGGCTAGCAGTCCAGCTGCCATTAGAGCAGCATTTGCTGAGTTCTTTTCAATGCTCATTTTTGTTTTTGCTGGCCAAGGCTCTGGCATGGCTTATGGCAAGCTTACAATGGGTGGACCCGCAACACCTTCAGGTCTCATAATTGCGTCACTATCCCATGCATTTGCGCTAATGGTGGCGGTTTCTGTTGGTGCAAACATTTCAGGTGGCCATGTCAACCCTGCTGTCACATTCGGTGCCTTCGTTGGAGGAAACATAACCTTCTTGAGAAGCATTCTTTATTGGTTTGCACAGTGTCTTGGTTCTGTTGTTGCTTGCATTCTTCTCAATTTCGCCACCGGTGGAATGGAAATATCAGCTTTCTCTCTATCTAATGGGGTGTCAGTGTGGAATGCATTAATCTTTGAGATAGTGATGACTTTTGGATTGGTATACACAGTTTATGCAACAGCAGTGGATCCAAAGAAGGGTAATGTGGGAATTATAGCCCCAGTAGCAATTGGGCTGATTGTGGGTGCAAATATCTTGGTTGGTGGTGTGTTTGATGGTGCATCAATGAACCCAGCAGTGTCATTTGGGCCAGCTTTGGTTAGCTGGACATGGACCAACCATTGGGTCTATTGGGCCGGCCCATTCATTGGTTCAGCAACTGCTGCCATTCTCTATGATAATATATTCATTGGTGATGATGGTCATCAACCCCTTTCTAATAGTGACTTCTAA 759 0.4519 MAVYRIAIGSPREASSPAAIRAAFAEFFSMLIFVFAGQGSGMAYGKLTMGGPATPSGLIIASLSHAFALMVAVSVGANISGGHVNPAVTFGAFVGGNITFLRSILYWFAQCLGSVVACILLNFATGGMEISAFSLSNGVSVWNALIFEIVMTFGLVYTVYATAVDPKKGNVGIIAPVAIGLIVGANILVGGVFDGASMNPAVSFGPALVSWTWTNHWVYWAGPFIGSATAAILYDNIFIGDDGHQPLSNSDF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03434 252 PANTHER AQUAPORIN-8 1 249 IPR034294 -
Aip09g03434 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aip09g03434 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Aip09g03434 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PANTHER AQUAPORIN TIP1-1 1 249 - -
Aip09g03434 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g03434 252 SUPERFAMILY Aquaporin-like 14 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03434 Aip-Chr9 141002551 141003933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03434 1 252 Major Intrinsic Protein MIP AT4G01470 80.556 1.78e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03434 K09873 - gmx:100818197 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03434 09 141002551 141003933 Aip09g03434 09 141002551 141003933 ECH