Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip09g03409 | ATGATTTCTAATAAGGAAGACCGTTCCGCCACCGCGGCCCGAGCTGCAGCTTCTTCTTCTTCAAGGGATGATCGGCCCGCACCGCCGGCAGCACCCAACATTGTGATGTCGTCGAAGGATCACGATTCTCTCTTCAGCGGTGGTGGCATCAGCTTTCTCTCTGGAAGTCGAAATGGAAGATTTAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTTTTTGAGACCAAGATATCAGAGGTTGATGGTCAGACTGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGAACTGCAGAATACCTGAAGGATAATCTGTTTAAAAATTTAAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTATCTCAATGAGGAAAAGGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAGCTATGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGCGATTCCAGAGTAGTTGCATCCAGAGCTGGTACAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAGGAGGCAGGGGGATTCATAATTTGGGCAGGGACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGATAAACTTCTTAAACCATACGTTGTTGCTGACCCAGAGATTAAGGAAGAAGAAATAGATGGTGTGGATTTTATCATAATCGCCAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCGGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTCATTAAAGAAGCTTATGCGCGAGGAAGCTCAGACAACATCACTTGTGTCGTCGTTCGATTTGATCTCTCCTGA | 933 | 0.4491 | MISNKEDRSATAARAAASSSSRDDRPAPPAAPNIVMSSKDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETKISEVDGQTVAFFGVFDGHGGSRTAEYLKDNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRILVANVGDSRVVASRAGTAVPLSIDHKPDRSDERQRIEEAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIKEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS | 310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip09g03409 | 310 | PANTHER | PROTEIN PHOSPHATASE 2C 11-RELATED | 28 | 310 | - | - | |
| Aip09g03409 | 310 | SUPERFAMILY | PP2C-like | 55 | 308 | IPR036457 | - | |
| Aip09g03409 | 310 | ProSiteProfiles | PPM-type phosphatase domain profile. | 62 | 307 | IPR001932 | - | |
| Aip09g03409 | 310 | CDD | PP2Cc | 61 | 307 | IPR001932 | - | |
| Aip09g03409 | 310 | ProSitePatterns | PPM-type phosphatase domain signature. | 93 | 101 | IPR000222 | GO:0043169 | |
| Aip09g03409 | 310 | Gene3D | - | 55 | 309 | IPR036457 | - | |
| Aip09g03409 | 310 | SMART | PP2C_4 | 51 | 305 | IPR001932 | - | |
| Aip09g03409 | 310 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Aip09g03409 | 310 | Pfam | Protein phosphatase 2C | 63 | 300 | IPR001932 | - | |
| Aip09g03409 | 310 | PANTHER | ALPHABET, ISOFORM E-RELATED | 28 | 310 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip09g03409 | Aip-Chr9 | 140727013 | 140731640 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip09g03409 | 34 | 310 | PP2C-type Phosphatase Gene Family | AT1G43900 | 73.285 | 2.90e-156 | 439 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip09g03409 | K17506 | - | gmx:100776867 | 542.347 |