Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03393 ATGCCATTTCGAGCTCGCACTGCAATCTTCCGTTGGTCTCTGCATAGTGTTCCTTACAGTATCCATCACCATCAACCTCATTCTCTTCACTCTTCTTCTTCTTCCATTCTCCTCAAGTTCACTTCTTTGGCCCAACCTCAGGTTAATGGCAAATCTGTTGAAACATGTGACGATGATGGATTTTTGTCATGGTTGGAGCGGAAAGCTGGTTGTAGAATTTCTTCATCGCTTTCAATTGGTAAATCTTCATATGGCAGGTCTCTGTTTGCTTCTAAGGCGATAAAAACCGGAGATTGTATTTTGAAGGTTCCTTATAGAGTGCAAATAACAGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATGTTGCAAAACTTGCTGTTCTTCTTCTAATTGAGCGGAAATTGGGTCAGGACTCTCAGTGGAATCCTTATATCTGCCGTCTACCATGGCAAGAGGAGTTGCATAACACGATTTTTTGGAATGAAAGTGAGCTGGAGATGATTCATCGAAGCTCGGTTTATTGGGAAACAATTAACCAAAAGTCTCAAATTGAAAGGGACTTCTTGGCAATCAGACCTATTTTTGAATGTTTCAGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGTATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACCAATGGTTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGATGGGAATTCAGAAGCAATTGTGATGAGTGATGATGACAAACAATTATCAGAAGTTATCTCTGATCGTGACTATGCGCCTGGGGAGCAGGTACTGATAAGATATGGAAAGTTTTCAAATGCTACATTGATGTTAGACTTCGGTTTTACAGTCCCCTACAACATTTATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTTGTGCCTTCAAGGAAAAACGCGGAAAACTTGAAACATTCTTGGAACATCTTCACAATCAATATTTGGATATCTGATGGAGCTATGATCATCACATAG 1083 0.3998 MPFRARTAIFRWSLHSVPYSIHHHQPHSLHSSSSSILLKFTSLAQPQVNGKSVETCDDDGFLSWLERKAGCRISSSLSIGKSSYGRSLFASKAIKTGDCILKVPYRVQITADNLPAKIKSLISEEVANVAKLAVLLLIERKLGQDSQWNPYICRLPWQEELHNTIFWNESELEMIHRSSVYWETINQKSQIERDFLAIRPIFECFSQSFGDITYKDFMYACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVISDRDYAPGEQVLIRYGKFSNATLMLDFGFTVPYNIYDQVQIQLDIPKHDPLHKMKLELMQQYFVPSRKNAENLKHSWNIFTINIWISDGAMIIT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03393 360 ProSiteProfiles SET domain profile. 69 282 IPR001214 GO:0005515
Aip09g03393 360 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 51 345 - -
Aip09g03393 360 Gene3D set domain protein methyltransferase, domain 1 58 296 - -
Aip09g03393 360 Gene3D - 298 347 IPR036464 -
Aip09g03393 360 PANTHER OS01G0976450 PROTEIN 51 345 - -
Aip09g03393 360 SUPERFAMILY SET domain 59 300 IPR046341 -
Aip09g03393 360 Pfam SET domain 85 282 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03393 Aip-Chr9 140590768 140596998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03393 60 275 NAC Transcription Factor Family AT3G56570 24.554 1.08e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip09g03393 SET 3.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03393 K19199 - gmx:100818002 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03393 09 140590768 140596998 Aip09g03393 09 140590768 140596998 ECH