Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03389 ATGTGGATTTTAGGTGCAGATAAGAGTGTTATTACTATCATGTGTCTCCACATCTTATGTTTATTATTACTTCTATTGAAAGTAAATGCAAAAGAAGAATCATATGAATCTGATGATAGAGTCATAAATCTTCCTGGCCAGCCTTCAAGCCCATCAGTTTCACACTTCTCAGGTTATATCACTGTCAATGAAGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCTTCCAATAAGCCCCTCCTTCTTTGGCTCAATGGAGGACCTGGATGTTCCTCCATTGGTTATGGTGCAGTTGTTGAGGTAGGACCTCTTATCATCAACCAAAATGGTGATGGTCTGCATTTCAACACATATTCTTGGTATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACAGCAATACAACTTCTGATTATCTCACCATTTTAGAGGATAATCTTGTGGCTGAGGATTCCTACAATTTCTTGGTGAATTGGCTGCAACAATTCCCACAATTCAAATCCAGGGACTTTTTCATAGCTGGAGAAAGCTATGGTGGGCACTATATCCCCCAACTCGCAGAGCTAGTCTTCGATCGGAACAAAGATAAAAGCAAATACCCTTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAAAAACTGATGATTACTATGATAATAAAGGCCTTGTGGAATATGCATGGAGCCATGCAGTTATATCAGACCAACAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCTGAATGGTCTAATGAATGTAACATTGCCATGAATGAAATCTTCCGAGATTACTCAGAGATTGACATATACAACATTTATGCTCCGTCGTGTCGACTTAATAACTCATCGGACAATAATCATGGCCGGGAACCACTCACAAAGATGATGAGAATTGGAAATAATAATTATAAAGTAAAGAGGATGAGAATTTATTTTGAAGGCTATGATCCATGCTATTCCACATATGCAGAGGAATATTTCAATAGGGTGGATGTTCAATCATCTTTTCATGCAAATATTAGAGGAAATACTAATAATGCAGCATGGAAAGTTTGCAATAATTCCATATTGAGGAGTTACAATTTTTCTGTATTTTCGGTCCTACCAATCTACACAAAACTCATCAAGGGTGGCCTTAAAATATGGATTTACAGTGGAGACACAGATGGGAGAATACCAGTGATAGGGACACGGTATTGGGTTGAAGCTCTGGGATTATCTCTAAAGTCTAGTTGGCAGAATTGGTACCATGACAATCAGGTTGGTGGAAGGATAGTGGAATATGAAGGGCTAACATACGTGACAGTGAGAGGGGCAGTTACACAATTCAAAAGGTTTCATCGTTCATCTTTTCTTTGGCTCTCACCTTCGTTCTGCTGCTGCTTCAACTGGTTTTATTTTGACCGTTTGGAACCTTTTCACTCACTCAAGAAGCCGCAATCACCTCCCCTGAATTCCAGTGAGGCCTGA 1521 0.3892 MWILGADKSVITIMCLHILCLLLLLLKVNAKEESYESDDRVINLPGQPSSPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEVGPLIINQNGDGLHFNTYSWYQEANLLFVESPVGVGFSYSNTTSDYLTILEDNLVAEDSYNFLVNWLQQFPQFKSRDFFIAGESYGGHYIPQLAELVFDRNKDKSKYPFINLKGFIVGNPKTDDYYDNKGLVEYAWSHAVISDQQYDKAKQVCDFKKSEWSNECNIAMNEIFRDYSEIDIYNIYAPSCRLNNSSDNNHGREPLTKMMRIGNNNYKVKRMRIYFEGYDPCYSTYAEEYFNRVDVQSSFHANIRGNTNNAAWKVCNNSILRSYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRIPVIGTRYWVEALGLSLKSSWQNWYHDNQVGGRIVEYEGLTYVTVRGAVTQFKRFHRSSFLWLSPSFCCCFNWFYFDRLEPFHSLKKPQSPPLNSSEA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03389 506 Gene3D - 384 468 - -
Aip09g03389 506 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 13 457 - -
Aip09g03389 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Aip09g03389 506 Pfam Serine carboxypeptidase 45 456 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 457 IPR001563 GO:0004185|GO:0006508
Aip09g03389 506 Gene3D alpha/beta hydrolase 33 305 IPR029058 -
Aip09g03389 506 Gene3D - 335 373 - -
Aip09g03389 506 SUPERFAMILY alpha/beta-Hydrolases 37 456 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03389 Aip-Chr9 140518662 140537795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03389 366 456 Calmodulin-binding Proteins AT2G22960 30.435 2.68e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03389 K16297 - gmx:100792930 733.406