Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03375 ATGTCAGGAGGACAAAAACAAAGAATCGCCATCGCAAGAGCAATAATAAAAAAACCAAGAATCCTCCTTCTGGACGAAGCAACAAGCGCACTCGACTCCGAATCTGAGCGCGTTGTTCAAGAAGCGCTCGACAAAGCCGCCGTTGGCCGCACCACCGTCATCATTGCCCACCGCCTTTCCACTGTTCAGAATGCTGACCTCATTGCTGTCGTTCAGAATGGCAAGGTCGTGGAAATAGCGCCCCACCAAACCCTAATTCAAAATGACGCCGGTATTTACGCTTCCCTCGTTCACCTCCAAGCGTCAAAGAATAATAATGAACAAGACGACACTGTCGTTTTGCCTCCTCCTACTCATCCGTCATCCATTTCCAACAGCGATATTCATAACACAAGCAGTCGAAGGCTCTCGCTAGTTAGCCGATCTAGCTCAGCAAACTCCGTTGCCCGCGTGGCTTCTTGTGCCGGTGATGATGATGACGTAGAAAAAATAGTTGAAGATAACAACTTTGCTGTTCCTTCATTTCGCAGGCTCCACGGACCGAGAACGAGGAACCGCGTCTCCGTTTCAAGGTCTTCTCAAACACCACCGTTGGGTGGATGCACTTTATCATTTCTCACATACGTGGGGGTTCCTCAGCAGCTTATGGTATCGATGCTGTTGAACGAGGGCTGA 675 0.4948 MSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDKAAVGRTTVIIAHRLSTVQNADLIAVVQNGKVVEIAPHQTLIQNDAGIYASLVHLQASKNNNEQDDTVVLPPPTHPSSISNSDIHNTSSRRLSLVSRSSSANSVARVASCAGDDDDVEKIVEDNNFAVPSFRRLHGPRTRNRVSVSRSSQTPPLGGCTLSFLTYVGVPQQLMVSMLLNEG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03375 224 Pfam ABC transporter 1 29 IPR003439 GO:0005524
Aip09g03375 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 100 IPR027417 -
Aip09g03375 224 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 49 129 - -
Aip09g03375 224 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 1 98 - -
Aip09g03375 224 Gene3D - 1 114 IPR027417 -
Aip09g03375 224 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 49 129 IPR039421 -
Aip09g03375 224 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 98 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03375 Aip-Chr9 140339031 140339772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03375 1 126 Calmodulin-binding Proteins AT2G36910 55.906 8.17e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03375 K05658 - gmx:100807709 197.208