Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03346 ATGCATTACGAGGTTGTAGGATTGGTGGTAGCTATGTTAGTGTGGATGGGTTGTGCACTAATCAGAGAACGCAGGCACCGGAGATTGGAGGAGCTAAGGCAGCTTCCACCGGGACCAAGATGGTGGCCGGTGGTCGGCAACATCTTCCAACTAGGTTGGTCTTTGTCACCACACGAGTCTTTCGCAAAGCTGGCTCGACACCACGGTCCAATCATGACTCTCTGGTTAGGGTCCATGTGCACCGTGGTAGTCTCCTCCAGCGAGGCTGCATGTCATATGTTTAAAAACAATGATGTCATTCTCGCTGGTAGGAAAATCTACGAAGCTATGAGGGGTCCTTACGGATGTGAAGGCTCCCTCATAACCTCGCAGTACGGCCCGCACTGGCGCATGCTGAGGCGACTTAGCACAACAGAATTTTTCGCGACGAGTCGCTTAGATGCCATGCGGGCCGTGCGTGCAAAATGCATAAACCGCATGGTGCAGATCATAGAAGGTGCGGCTGGAGATGAATCCTCCGGCGGCGTTGAGGTGGGGAGATTGTTCTTCATGATGTCGTTCAACCTGATTGGGAACCTGATATTCTCGAAGGATTTGTTGGAGGGTGAGATGGAGAGAGGGGCGAGATTCTACGAGCATGCGGTGAAGGTGATGGAGTATGCAGGGAAGCCGAATGTGGCGGATTTCATGGGGGTGCTGAAGTGGGTTGATCCGCAGGGAATACGGCGGAGGACGCAGTATCACGTGGAAAAAGCATTCGAGATTGCTGGATGGTTCATTAAAGAGAGGATGGAGAGTGGGTGCGGAAGGGGAATGAGTAAAGATTTCTTGGATGTGCTTTTGGAGTTTCATGGAGATGCTGCCACTGGCCCTTACACTTTCTCTCCAAGAATCATCAACGTCGTCGTCTTTGAAATGTTTACGGCGGGGACAGACACAACAACGAGCACACTGGAGTGGGCAATGGCGGAGCTGTTGCACAACCCAAGAGCCCTGGAGAAGGTGCAGACGGAGCTGAGGACGAAGATTGGGCCCCACAGGAACATGGAAGAGAACGACATCGACCACCTTCCTTATCTGAAAGCAGTCATCAAAGAAACCCTGAGACTGCACCCACCTCTACCGTTCTTGGTCCCTCACATGGCGATGGACTCTTGCAAGCTGCAGGGCTACCACATCCCCAAGCACTCGCAAGTTCTGGTCAACGTTTGGGCCATTGGAAGGGACCCGAAGGCCTGGGACGCTCCATTGCTCTTCTGGCCTGAGAGGTTTATGCACATGGATCATGTGGATTTCAAGGGTCACCACTTTGAGTTCATACCCTTTGGCTCTGGTAGAAGAATGTGCCCTGCCATGCCACTTGCTTCTAGGGTGCTCCCACTCGCACTTGGATCTTTGTTGCATAAGTTTGACTGGGTTCTACCACGTGGCATGAATCCCCACGAGATGGACATGAGAGAGGGCTTCGGAATTACTCTCAGAAAAGCTCTTCCTTTGAAGGCCATACCACTCCCTCACTACTCTTCTACAAAACAGGGGACCTCAACATAA 1551 0.5216 MHYEVVGLVVAMLVWMGCALIRERRHRRLEELRQLPPGPRWWPVVGNIFQLGWSLSPHESFAKLARHHGPIMTLWLGSMCTVVVSSSEAACHMFKNNDVILAGRKIYEAMRGPYGCEGSLITSQYGPHWRMLRRLSTTEFFATSRLDAMRAVRAKCINRMVQIIEGAAGDESSGGVEVGRLFFMMSFNLIGNLIFSKDLLEGEMERGARFYEHAVKVMEYAGKPNVADFMGVLKWVDPQGIRRRTQYHVEKAFEIAGWFIKERMESGCGRGMSKDFLDVLLEFHGDAATGPYTFSPRIINVVVFEMFTAGTDTTTSTLEWAMAELLHNPRALEKVQTELRTKIGPHRNMEENDIDHLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKLQGYHIPKHSQVLVNVWAIGRDPKAWDAPLLFWPERFMHMDHVDFKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHKFDWVLPRGMNPHEMDMREGFGITLRKALPLKAIPLPHYSSTKQGTST 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03346 516 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PANTHER CYTOCHROME P450 76A1-LIKE 1 509 - -
Aip09g03346 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Aip09g03346 516 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PANTHER CYTOCHROME P450 FAMILY 1 1 509 - -
Aip09g03346 516 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03346 516 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03346 Aip-Chr9 139948555 139950515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03346 4 506 Cytochrome P450 AT3G52970 58.555 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03346 - - lja:Lj5g3v2300360.1 756.903