Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03345 ATGGGTGGAAAACGAGTCACCAATAAGCGGCAACGCGACGCCGCCGCCGACCAGCTTCGCACTGTCAAGAGAGAACGCGTCGCCGCTGCTGAGGGCGCCGACGAGGCCGAGTCCCCTCAGAAACAAGATCCGGCAAGTCGCCGGTTCATACGCTCCGAGTTTTTCAAACTCAAAACTCTCATTAGTGAGAAAAAGGACGATTTGATGAACACCGATTCCGACAAGTTCGATTCCATCTTGAATGAGTTCCACAAGCTCCACGATCAAGTCCAGAAGCCGAGAGAGCAGGTTGCAGATGCAGAGGCGCTGCTGGAGTTGACTAACAGTTTGGTGATGTCAGTGAGGTCTATGGTGAATGACAATATTACCCCTGCTGAATTTGTTGGCTGTTTGATCAAGGAATATGGCCAACCATCCATCCAAGACCCGGAGTGCAACTCGATCGACTGGAAAAAACTTGGTCTTGCTGTGTCCCCCATGTTTATGAAGGTTCAGGGTTGTTGCACCATGCTTGGTCCCATGGAGAGGGAGTTGAAGCAACGCAAGATCGGAGTTCAGAGACAAAGAACAAAGCCAACATCTGAAAGGGCTAGGCCTCAAGAGGTTGTCCAGCCCCAAGAAAAGGAAAGATCTGATACTGATCAAAACATGAAAGTAATGTTTGACATCTTGGCGAAAATGAGACGCGTTCAACTTGAATGTCTAATTCTGAACAGAACATCATTTGCTCAGACTGTTGAAAACTTGTTTAGCCTATCATTTTTAGTCAAAGATGGTCGGGCTCAGATCACTGTGGATGAAAACCGCATACACTACGTTTTGCCTAGGAATGCTCCATCAGGTGATTCTCTGAGAGCTAAAGAAGCCACTTTCACTCATTTCATGTTCAGACTTGATTTCCAAGATTGGAAGTTAATGAAGGATATGGTGCCTGAGGGCAAGGAGTTAATGCCTCATAGGACTCAGTTTTGCACTGTTGTTGGTTCTCAACCACAGATGGGTTCTGATGATGGTTCCCCACATCCTCTAACTGTCACACCTATCAGGAAATTTTCTCGGAACCGAGGGCTGGTTGTGCAGGAGGAAGGTGTGGTAGAGGAATCTCCTGAATGTGATGATGAAAAATCTTCCAGAGCAGCTGCCATCAGAACGTGTAAGCGTAAGCTTACATAA 1173 0.4723 MGGKRVTNKRQRDAAADQLRTVKRERVAAAEGADEAESPQKQDPASRRFIRSEFFKLKTLISEKKDDLMNTDSDKFDSILNEFHKLHDQVQKPREQVADAEALLELTNSLVMSVRSMVNDNITPAEFVGCLIKEYGQPSIQDPECNSIDWKKLGLAVSPMFMKVQGCCTMLGPMERELKQRKIGVQRQRTKPTSERARPQEVVQPQEKERSDTDQNMKVMFDILAKMRRVQLECLILNRTSFAQTVENLFSLSFLVKDGRAQITVDENRIHYVLPRNAPSGDSLRAKEATFTHFMFRLDFQDWKLMKDMVPEGKELMPHRTQFCTVVGSQPQMGSDDGSPHPLTVTPIRKFSRNRGLVVQEEGVVEESPECDDEKSSRAAAIRTCKRKLT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03345 390 PANTHER UNCHARACTERIZED 20 373 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aip09g03345 390 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 20 373 - -
Aip09g03345 390 Pfam Nse4 C-terminal 230 314 IPR014854 -
Aip09g03345 390 MobiDBLite consensus disorder prediction 366 390 - -
Aip09g03345 390 MobiDBLite consensus disorder prediction 180 214 - -
Aip09g03345 390 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03345 Aip-Chr9 139945173 139947869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03345 9 390 Non-SMC Element family AT1G51130 47.837 2.47e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03345 K22825 - gmx:100792117 436.032