Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03315 ATGTTCAAGATTGCGCTCAAGGAGTGCAGGCACGTGTTTGAGAATCTCGGCTCCATTGTTGATGTTGGTGGTGTCTCCAAGCTTATTCATCAAGAGTTTCCGCAGTGGAAGTGCACCGTTTTCGACCAGCCGGAGGTTGTTGGTAACCTCAAAGGAGATGGGAATTTGAACTTTGTTGCCGGTGACATGTTCAAATCGATCCCTTCTGCTGATGCAGTCTTACGGCAGCAACAAAGAATCTAG 243 0.4774 MFKIALKECRHVFENLGSIVDVGGVSKLIHQEFPQWKCTVFDQPEVVGNLKGDGNLNFVAGDMFKSIPSADAVLRQQQRI 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03315 80 PANTHER O-METHYLTRANSFERASE 1 74 IPR016461 GO:0008168
Aip09g03315 80 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 74 IPR029063 -
Aip09g03315 80 Pfam O-methyltransferase domain 5 74 IPR001077 GO:0008171
Aip09g03315 80 Gene3D Vaccinia Virus protein VP39 1 77 IPR029063 -
Aip09g03315 80 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 80 IPR016461 GO:0008168
Aip09g03315 80 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03315 Aip-Chr9 139552004 139552246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03315 13 74 Monolignol Biosynthesis Gene Families AT3G53140 40.299 1.07e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03315 - K22588 aip:107616277 155.221