Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03313 ATGTTCAAGATTGCGCTCAAGGAGTGCAGGCACGTGTTTGAGAATCTCGGCTCCATTGTTGATGTTGGTGGTGTCTCCAAGCTTATTCATCAAGAGTTTCCGCAGTGGAAGTGCACCGTTTTCGACCAGCCGGAGGTTGTTGGTAACCTCAAAGGAGATGGGAATTTGAACTTTGTTGCCGGTGACATGTTCAAATCGATCCCTTCTGCTGATGCAGTCTTACTCAAGTGGATTTTACATGACTGGAATGATGAGCAGGCCTTGAAGATATTGAAGAACAGCAAGGAAGCTATTTCGGAAAGAGGGAAAGAAGGGAAGGTGATAATCATAGACATATCCATCGATGAAACCAGCGATGATAAGGAATTGATTGAGCTGAAACTGGATTATGATTTGGTGATGTTGGCAATGTTCAATGGAAAAGAAAGAGAGAAGAAGGAATGGGACAAGCTCATCCATGAAGCAGGCTACAGTAGATACACCATTACCCCAATTTGTGGCTTCAAATCTCTTATTGAAGTTTACCCTTGA 531 0.4331 MFKIALKECRHVFENLGSIVDVGGVSKLIHQEFPQWKCTVFDQPEVVGNLKGDGNLNFVAGDMFKSIPSADAVLLKWILHDWNDEQALKILKNSKEAISERGKEGKVIIIDISIDETSDDKELIELKLDYDLVMLAMFNGKEREKKEWDKLIHEAGYSRYTITPICGFKSLIEVYP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03313 176 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 176 IPR016461 GO:0008168
Aip09g03313 176 PANTHER O-METHYLTRANSFERASE 1 176 IPR016461 GO:0008168
Aip09g03313 176 Pfam O-methyltransferase domain 6 158 IPR001077 GO:0008171
Aip09g03313 176 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 1 176 - -
Aip09g03313 176 Gene3D Vaccinia Virus protein VP39 1 176 IPR029063 -
Aip09g03313 176 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 175 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03313 Aip-Chr9 139544378 139545000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03313 13 157 Monolignol Biosynthesis Gene Families AT5G54160 39.333 4.51e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03313 - K22588 aip:107616277 354.369