Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03301 ATGGAGAGTTTCTGGAGCATGTTTTGTGGGGAATCTGGTTGTTCAGGAAATCCTTATTGCAGTTATGATTTCAAGTTTTTGAAGGATCCTTCCTCATGTATCAACCATTTTCTGATCTTATGCATTCATGTGTTGCTTCTCATCATGATCTCATCAATCACCATGTTTCACAAGCCCTCTCCACTGAAAAAACAGCATCATCATGGACAAAGCTATTCAAGATTGCAGCTAGTTTCTGCCATAGCCAATGGCTCTTTGGGCTTGGTACATTTGATCTCAGGATTCTGGTTCCTAGAAGAGAATCTGAGAAAAACCAGAACTGTTTTCCCTCTTGATTGGTGGTTTCTTGAATTCATTCAAGGGTTGTCATGGTTGTTTGTAGGATTAACAATGAGTCTTAGGGTGAAACAACTTCCAAGAACATGGTTAAGGCTGATTTCTGTTCTTATTTTCTTGATTTCTGGAATTCTTTGTGCTTTGTCCTTGTTCTATGCAGTTAGTAGCAGAGGAATTTCCCTGAAAGTTGTTTTGGATGTTCTATCTTTTGGCGGCGCAATTTCATTGCTACTATGCAGTTACAAGGAATCTAAGCATAGAGACTTTGAAGGAGAAGAAAATTATGAAAGCCTTTACATGCCTTTAAATGATGAATCCATGTCCAACTCAATTGATTCTGATTCTGTTAGCTCTGTCACACTATTTTCTGGAGCCGGAATCTTCAGTTGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAAGAGGAAAACAGAAAACACTTCAGGAACAAGACATTCCCAAGCTCCGTGAGGCCGACCGAGCCGAAAGCTGTTACTTTCAGTTCCAAGAACAATTGAACAAGCAGAAGATGAAAGAACAATCAGCACAGCAGCCATCACTCTTGAAAACAATAATTATGTGCCATTGGAAAGAGATTCTGATCTCAGGATTCTTTGCATTGCTGAAGGTGATAACTCTCTCTTGTGGACCTCTGCTTCTAAATTCCTTTATACTTGTTGCTGAGGGTAATGAGAGTTTCAAATATGAAGGTTATGTATTGGCCATATCATTGGTCATTACAAAGATCATAGAATCTTTATCCCAAAGGCAATGGTACTTCAGAACAAGACTAATTGGTTTGAAAGTTAGATCACTGCTTATTGCAGCTATTTATCAGAAGCAACTAAGACTATCCAATGCTGCTAGATTGGTGCATTCTGGTGGTGAGATCATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACATGGACCACCAGTGTTCAGCTTTGTATCGCCTTAGTAGTACTTTTTCGCGCCGTTGGGCTCGCCACATTCGCTTCCTTGGCAGTGATACTTCTCACCGTGCTTTGCAACACTCCACTTGCAAAGTTACAGCACAAGTTCCAGAGGAAACTTATGGTGGCGCAAGACGAGAGATTGAAGGCTACTTCTGAGGCTCTTGTGAATATGAAGGTGCTGAAGCTATATGCCTGGGAAACCAATTTCAGAAATGCCATTGAAAGATTGAGGAATGTTGAGCTCAAAAGACTTTCTGTAGTGCAATTGAGGAAAGCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTATCTGCTGCATCCTTTGGAGCATGCTACCTTCTTGGTGTTCCTCTACATGCCAACAATGTTTTCACTTTCGTCGCGACTCTGCGCCTCGTTCAAGATCCTATTAGAACCATCCCTGATGTTATTGGGGTGGTGATCCAAGCAAAAGTTGCATTCTCAAGGATTTTGAAATTCCTTGAGGCACCTGAACTAGACAACCAAAGTTTCAGGAAGAAGCATTTTAGCGAAAACATGAGAGGTTCGATTTCAATAAAGTCTGCTGAGTTTTCATGGGAAGGTAATGGATCAAAACCAACTCTGAAGAACATAAATTTGGAGGTTAGAGCAGGGCAAAATGTGGCTATCTGTGGAGAAGTTGGCTCTGGAAAATCAACCCTCTTAGCTGCAATTCTCAGAGAAGTTCCCATTACTCACGGAACTATTGAAGTTTATGGAAAGTTTGCCTATGTTTCTCAAACTGCATGGATACAGACAGGTACAATAAGGGATAACATATTGTTTGGATCAGCAATGGATGCTGAAAAGTATCAAGAAACACTTCACAGGTCTTCACTGATGAAGGACCTTGAGCTTTTTCCCCATGGTGATCTCACTGAGATAGGGGAAAGAGGGGTTAACCTGAGTGGAGGCCAGAAGCAACGGATTCAGCTCGCTCGCGCTCTTTACCAGAATGCTGATATATACCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTATTCAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTCACTCATCAAGTTGATTTTCTTCCAGCATTTGATTCTGTTTTGTTGATGGCAGAGGGGAAAATCCTACAAGCTGCTCCTTATCACCATCTCTTGAACTCAAGCAAAGAATTTCAGGATCTTGTCCAGGCTCACAAAGAAACCGCCGGATCGGACAGGCTCGTGGATGCTACTTCTTCTTCTAACAGACTTACACACAATCCTGGGGAGATAAGGAAAACATATGTAGAGAATCAGTTGGAAACTTCACGTGGCGAGCGCGATCAATTGATCAAGCAAGAAGAAAGAGAAGAAGGAGACAGGGGATTGAAGCCATACTTACAGTATCTGAATCAAAACAAAGGATATTTGTACTTCTCTGTGGCTGCACTTTCTCACCTCTCATTTGTGATTGGCCAGACATTGCAGAACTGGTGGATGGCTGATAAAGTTGATGATTCTAATGTCAGCACATTGCATCTGATTGTTGTCTACTTGTTGATTGGATTTGCTTCAACATTTTTCTTGTTGATTAGAAGCCTTGTAGCAGTTGCTTTGGGCCTTCAATCATCAAAATCTATGTTCTTACAGCTTTTGAATTCCCTCTTCCGCGCGCCGGTGTCCTTCTATGACTCCACACCATTAGGAAGAATTCTTAGTAGGGTCTCCTCTGATCTGAGCATTGTGGATCTTGATGTTCCATTTAGCCTTGTTTTCGCAGTGGGAGCTACTAACACTTGCTATGCCAATCTTATAGTCTTAGCAGTCATTACTTGGCAAGTGTTGTGTGTCTCTATACCAATGGTTTACATAGCAATTCGCTTGCAGAGCTACTACTTTGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTATGTAGCTAATCATTTAGCCGAATCTGTTGCCGGGGCTGCGACGATAAGGGCTTTCGAGGAAGAACACAGGTTTTTCATGAAGAATCTTGATCTCATTGATGTGAATGCAAGCCCTTTCTTCCACAGCTTTGCAGCAAATGAGTGGCTGATGCTACGCTTAGAAACAATCAGTGCAGTTGTTTTTGCAGCCGCAGCACTTTCCATGGTGGTGCTTCCACCAGGGACTTTCACCTCAGGATTCATTGGCATGGCTCTATCATATGGACTTTCATTAAACTCGTCCCTAGTATTTGCAATTCAAAATCAATGCACTGTAGCAAACCAGATAATCTCAGTGGAGAGGCTAAACCAATACATGTATATAGCAAGCGAGGCACCAGAAGTTATACAAGAAAATCGTCCTCCTCCCAATTGGCCTATTAAGGGAAAAGTACAAATTCATAATTTGCAGATAAGATACAGGGAAAGTGCACCGCTTGTACTACGTGGAATCACGTGCACGTTTGAAGGAGGGCACAAGATTGGAATAGTTGGAAGAACAGGGAGTGGAAAATCTACATTAATAGGTGCATTGTTCCGGCTGGTGGAGCCAGCAGGTGGAAGGATCATAGTTGATGGGATTGATATTTCTTCAATTGGACTCCATGATTTGAGGTCACGTTTTGGTATCATACCTCAGGATCCTACTCTCTTCAATGGCACTGTTAGATACAATTTGGACCCTTTATCTCACCACTCTGATCATGATATTTGGCAGGTTCTTGGAAAGTGCCAGTTGCTAGAAGTTGTGAAAGAGAAAGAAGGCGGCTTAGACTCTTCGGTTGTTGAAGCTGGGGCGAACTGGAGCATGGGACAACGGCAACTGTTCTGTTTGGGGCGTGCACTTCTGAGGAGAAGTAAGATTTTGGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATCAGAACCGAGTTTGCAGATTGTACTGTAATCACAGTTGCACATAGGATTCCAACTGTCATGGATTGCACCAAGGTCGCTGCTATCAGTGATGGAGAATTGGTTGAGTATGATGAGCCCATGAACTTGATGAAGCAAGAAGGATCATTGTTTGGACAACTTGTTAAGGAATATTGGTCTCATTTTCAGTCTGCAGAATCTCACTGA 4461 0.4203 MESFWSMFCGESGCSGNPYCSYDFKFLKDPSSCINHFLILCIHVLLLIMISSITMFHKPSPLKKQHHHGQSYSRLQLVSAIANGSLGLVHLISGFWFLEENLRKTRTVFPLDWWFLEFIQGLSWLFVGLTMSLRVKQLPRTWLRLISVLIFLISGILCALSLFYAVSSRGISLKVVLDVLSFGGAISLLLCSYKESKHRDFEGEENYESLYMPLNDESMSNSIDSDSVSSVTLFSGAGIFSWMSFWWLNPLMKRGKQKTLQEQDIPKLREADRAESCYFQFQEQLNKQKMKEQSAQQPSLLKTIIMCHWKEILISGFFALLKVITLSCGPLLLNSFILVAEGNESFKYEGYVLAISLVITKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYQKQLRLSNAARLVHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVILLTVLCNTPLAKLQHKFQRKLMVAQDERLKATSEALVNMKVLKLYAWETNFRNAIERLRNVELKRLSVVQLRKAYSNFLFWASPVLVSAASFGACYLLGVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFSRILKFLEAPELDNQSFRKKHFSENMRGSISIKSAEFSWEGNGSKPTLKNINLEVRAGQNVAICGEVGSGKSTLLAAILREVPITHGTIEVYGKFAYVSQTAWIQTGTIRDNILFGSAMDAEKYQETLHRSSLMKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMAEGKILQAAPYHHLLNSSKEFQDLVQAHKETAGSDRLVDATSSSNRLTHNPGEIRKTYVENQLETSRGERDQLIKQEEREEGDRGLKPYLQYLNQNKGYLYFSVAALSHLSFVIGQTLQNWWMADKVDDSNVSTLHLIVVYLLIGFASTFFLLIRSLVAVALGLQSSKSMFLQLLNSLFRAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATNTCYANLIVLAVITWQVLCVSIPMVYIAIRLQSYYFATAKELMRMNGTTKSYVANHLAESVAGAATIRAFEEEHRFFMKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAAALSMVVLPPGTFTSGFIGMALSYGLSLNSSLVFAIQNQCTVANQIISVERLNQYMYIASEAPEVIQENRPPPNWPIKGKVQIHNLQIRYRESAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGRIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSHHSDHDIWQVLGKCQLLEVVKEKEGGLDSSVVEAGANWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGELVEYDEPMNLMKQEGSLFGQLVKEYWSHFQSAESH 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03301 1486 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 68 1486 - -
Aip09g03301 1486 MobiDBLite consensus disorder prediction 885 904 - -
Aip09g03301 1486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 68 1486 - -
Aip09g03301 1486 Gene3D - 603 870 IPR027417 -
Aip09g03301 1486 SMART AAA_5 1266 1451 IPR003593 -
Aip09g03301 1486 SMART AAA_5 655 828 IPR003593 -
Aip09g03301 1486 CDD ABCC_MRP_domain2 1238 1458 - -
Aip09g03301 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Aip09g03301 1486 SUPERFAMILY ABC transporter transmembrane region 301 606 IPR036640 GO:0005524|GO:0016021
Aip09g03301 1486 CDD ABCC_MRP_domain1 628 828 - -
Aip09g03301 1486 Gene3D ABC transporter type 1, transmembrane domain 888 1221 IPR036640 GO:0005524|GO:0016021
Aip09g03301 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g03301 1486 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Aip09g03301 1486 Gene3D ABC transporter type 1, transmembrane domain 301 602 IPR036640 GO:0005524|GO:0016021
Aip09g03301 1486 Gene3D - 1223 1475 IPR027417 -
Aip09g03301 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1467 IPR027417 -
Aip09g03301 1486 CDD ABC_6TM_ABCC_D2 922 1215 IPR044726 GO:0140359
Aip09g03301 1486 CDD ABC_6TM_ABCC_D1 314 601 IPR044746 GO:0140359
Aip09g03301 1486 Pfam ABC transporter transmembrane region 935 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g03301 1486 Pfam ABC transporter transmembrane region 312 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g03301 1486 Pfam ABC transporter 1257 1405 IPR003439 GO:0005524
Aip09g03301 1486 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Aip09g03301 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1474 IPR003439 GO:0005524
Aip09g03301 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g03301 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 851 IPR027417 -
Aip09g03301 1486 SUPERFAMILY ABC transporter transmembrane region 913 1223 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03301 Aip-Chr9 139399122 139406574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03301 622 882 Calmodulin-binding Proteins AT2G36910 27.778 1.61e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03301 K05666 - gmx:100784336 2388.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03301 09 139399122 139406574 Aip09g03301 09 139399122 139406574 ECH