Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03296 ATGATTCATGAAGCCGAAGCACTGAAACTCTGCAGTTGTGTTCCAACTTCCAATGCGAATTTTGCCATCAAGATCATTAATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCGAGAATTTACAGGAATTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAAGCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGGCAAGCGTGAAAATGTTTTACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGCAAAATCTGGTAGCTGGGTTGTTACACATTTTGTAAAGGAACACACACACCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATTCGGGCGAACGGGATAGAATTCGAAAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGTCACCTACAAAAGACATCTTGAATTGATACTCGAGCATATTGACGAGTATAACGAGAGCCTATCAAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACTCTTTAA 750 0.4173 MIHEAEALKLCSCVPTSNANFAIKIINSKSQSFENLQELTAGKVAANLESPRSRIYRNSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKARSRIDNSAIGRIFVCNKEGYRMTGKRENVLRQRAETRVGCKAMIMVRKAKSGSWVVTHFVKEHTHPLAGPGGGRRDFIYEQYSGERDRIRKLNQQLTAEKKRSVTYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03296 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 45 239 - -
Aip09g03296 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 239 - -
Aip09g03296 249 Coils Coil 216 236 - -
Aip09g03296 249 Coils Coil 174 197 - -
Aip09g03296 249 Pfam FAR1 DNA-binding domain 78 162 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03296 Aip-Chr9 139321126 139322732 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g03296 FAR1 6.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03296 - - adu:107476765 366.696