Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03288 ATGGCATTGACTCCACCACCTCATACAACAAGAGAAGAGGAACAACAACACAATAACAATAATGGGTGCCACATGAACCTCGCTATCTCCCCAAACTGCACCGGGGAGACACAAGCAAATTTGAGTGCTGTCATTAATCACTATGTCCACACTCTAAATCACTTCAACTTGCGCAACTTGGGGTACCCCACGAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTACAATTTCACCTAAACAATGCAGGTGATCCATTTGTTGGGAGCAGCTTCCGTCTAAATTCAACGTCATTTGAAGTTAGTGCTCTTGATTGGTTCGCTAATTTGTGGGACATACAAAAGAACAAGTATTGGGGATACGTCACTACTGGTGGAACAGAGGCCAATCTTCACGCCATTTTAGTAGGGAGAGAACAATTTCCTGATGGGGTTCTATATACTTCAGAAGATTCACATTATTCAATATTTAAAATAGCAAGAATATATCGAATGCAATGTGTCAAAGTTAGATCTCTTATCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTTCACTACTTCATCACAAGGACAGGCCAGCCATCATCAATCTTAACATAGGTACAACGATGAAAGGAGCTGTTGATGACATTGATCTTGTAATAAAAACACTTGAGGAAAGTGGTTTCAATCGTGATAGATTCTACATTCACTGTGATGCAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGCATCAAAGATAATAAGTTTCAAGAAACCCATTGGAAGTGTGAGTGTTTCAGGGCATAAATTCTTGGGATGTCCAATTCCCTGTGGGGTTGTAATAACGCGTTCAGAATACATTAATGCGTCATCAAGGGATGTTGAAATCATTGGTTCAAGGGATGCAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCTATCAAAAAGAAAGGCTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCAAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGTATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATCAATTTAGCCGTAGGTGGAACTTGGCGTGCCAAGGGAACATTGCACACGTGGTGGTCATGCAACATGTTACCATTCAAATGTTGGATTCTTTTGTTAATGAGTTTCTTCATAAACGTTCCTTTTCACGGTTTGAGGATTATGGCTCTTTTCAGCCTCTGTGCATAGCAGAAAAAGTTGGCGCTGCAAATTGTTCTTGCTCAATGCACAACTTGTATCATGATTGTGCATGCTAG 1341 0.4079 MALTPPPHTTREEEQQHNNNNGCHMNLAISPNCTGETQANLSAVINHYVHTLNHFNLRNLGYPTNQNFNYDALAPLLQFHLNNAGDPFVGSSFRLNSTSFEVSALDWFANLWDIQKNKYWGYVTTGGTEANLHAILVGREQFPDGVLYTSEDSHYSIFKIARIYRMQCVKVRSLISGEIDCADLKASLLHHKDRPAIINLNIGTTMKGAVDDIDLVIKTLEESGFNRDRFYIHCDAALFGIMLPFLKAASKIISFKKPIGSVSVSGHKFLGCPIPCGVVITRSEYINASSRDVEIIGSRDATITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEYSNIVVFERPLDHQFSRRWNLACQGNIAHVVVMQHVTIQMLDSFVNEFLHKRSFSRFEDYGSFQPLCIAEKVGAANCSCSMHNLYHDCAC 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03288 446 PANTHER SERINE DECARBOXYLASE 12 438 - -
Aip09g03288 446 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 261 282 IPR021115 GO:0016831
Aip09g03288 446 Gene3D Aspartate Aminotransferase, domain 1 320 408 IPR015422 GO:0003824
Aip09g03288 446 SUPERFAMILY PLP-dependent transferases 53 404 IPR015424 -
Aip09g03288 446 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g03288 446 PANTHER - 12 438 - -
Aip09g03288 446 Gene3D - 76 319 IPR015421 GO:0003824
Aip09g03288 446 Pfam Pyridoxal-dependent decarboxylase conserved domain 97 350 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03288 Aip-Chr9 139065904 139068761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03288 202 337 Calmodulin-binding Proteins AT1G65960 31.544 9.66e-08 52.0