Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03283 ATGGGTAGGAAGAAGCCTACGGCACGCGACGACGATAACGTGCCTGCTGCATCACAGGGAGGCGGCAAATCGAAGAAGAAGGTCGTTGTCGACGATAATGAGTATGACATCGGTGACCTCTCCGAGGAGCCGCAGCCTGTGGCACCACCAGCTGCCAAGAAGAAGGGCAAAAAGGATAATGCCAAAGCTAAGGCAAAGGGTAAGGACGACGAAGAAGATGACGATGATGTGGCAATTAGTGCGGCTGGGGACGATGATGAGGATGAGGATGCTGGGATTGTGTTTGCTGGGAAGAAGAAGAAGGGTAAATCTAAGAAAGGTGGTGGAGGCAGTGTGTTCGCTGCTGCATCTGGTTTTGGCTTGCTTGGTGATGATGACGGTGATGGTGGTGATGATGAAGATGATGACAAATCAGGGATAACTGGTGAGGGTGGTGACGCCAAGGAGGAGGAGGAGGACGAGGAGGCTGTGGTTAGTTTTACAGGGAAGAAGAAGCCTTCTAAGGGCTCGAAAAAAGGTGGTGGCAGTGTGTTCAGTGCCTCAGCTTTTGATGCTATTGATGATGGTGATAATGATGGTGGGGAGGAGGATGAGCTGGTGGTTAGTTTTTCGGGTAAGAAGAAGCCATCAAAGGGATCGAAGAAAGGCAGTTCATTCTCTGCCTCGGCCTTTGATGATGGTGAGGAGGTGGTGGATAGTGGTGGAGGTGAGGATGAACCAGTTATTGCTTTTACTGGGAAGAAGAAGTCTTCTAAAGGTGGCAGGAAGGGTGGTGTTGCTGCATTTTCAGCAGCTAGTTTTGGTGATATTGATGATGGGGAGGAGGCTAAGAATGAAAAGGAGGAAGATGAGGATGGTAAGGACATGCCAATTACCTTCTCTGGTAAGAAAAAGAAGTCATCAAAGTCTACGAAGAAGGCTTCATTTAGTTCAGCTTTTGCCGATGAAGAAGATGATTCTGTAGCTGAGCCTACTAGAGATGGTGAGGATGAAGATGATGTTTTGGTTGCGTTTTCGGGTAAGAAGAAGTCTTCTAAAAAGAAAACTAGTGCCAAACCATGTGATGAAACTGTTGAGCCTGAGCAACCTAGTGTTGGAGTTAGTAGTGCAGATGTTGACAACAATGTAAATAAGAGTGGAGTCACTGAAACCTCCAAAAATAAGAAGAAGAAGAAAAACAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGATGCGATTCTCGCGGAGCTTGAGGAGACAGTAGAATCAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCAGCTGCAGCTGCTGGAACTGCAGCAGAAAATGAAGCTAAAGAAGTTAAGGCCGAGCCTGCTGAAGCTAAGAAGAATGATTCAAAGGCCAAAGCAGTCGACAACAAGAAAATACCCAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGGAAGGAGGCTGAAGAAAGGCAGAAGAAAGAATTGGAGGAGAGGTTAAGGAAGGAAGAAGAGGAGCGACGTAGGCAGGAAGAACTTGAGAGACAGGCTGAAGAAGCTAGACGCAGGAAGAAGGAGAAAGAAAAGGAGAAGCTCCAGAGAAAGAAGCAAGAAGGTAAACTGCTAACTGGTAAGCAGAAAGAGGAGGCTCGCCGCTTGGAGTTAATGAGGAAGCAGTTTCTTAATAGCACAGGAGGTGTGACTGTCCCTGGTGGGGACTCTGGTGCACCAGCCAAAAGGCCTATATATCAGACAAAGAAGTCGAAACCAACCCATCATCAGCAGAATGGTGCTGCTGCCCCTGCCACCGCTGCCGTTGAGACGGCTGAAAGTCTTGAAGCAAAGGAAGAGACAGTCACTGATGCAGGTTCAGACGAACCAGAAAAGGTTGAAGAAACCGTGGTAGAGCAGGTGGAGGAGAAAGTTGAACCTCTGGAAGCTGCTGAAGACAATGGAGTAGATGATGATGAAGAAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAGGGTGCATTTGCTGATGAAGATTCTGAGCTTGTACCAGTTGCCAAAAAGGAGACAAAGACTGCTGTAACTATGAACAATGCTGCTGCAACAAAGAAAACAATTTCTAAGCCTGTGACCGAAGAAATTATAGATAGAAAGCTTGTTGCTGACAAGAATAACTCAGAACCACCAAAATCTGTTTTGCCAAGGGAACCTATTACTCAGTCAAAAGAAATGCAAAAGTCCTCTGTGTCTCCTAAGCCGAGTGGAGAGAACCTCCGTTCTCCAATTTGCTGTATCATGGGGCATGTGGATACTGGTAAAACTAAGCTGCTGGATTGCATTCGAGGTACTAATGTTCAAGAGGGTGAGGCCGGTGGTATCACACAGCAGATTGGTGCAACATACTTCCCTGCGGACAACATACGTGAAAGAACTAAGGAATTGAAAGCTGATGCAAAACTAAAAGTTCCTGGTCTACTGGTTATTGATACGCCAGGGCACGAATCATTTACTAACTTAAGGTCTCGGGGTTCAGGGCTATGTGATATTGCAATTTTGGTTGTAGACATTATGCATGGCTTAGAGCAACAGACAATTGAATCACTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTGGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATGCTCCAATTATCAAAGCGATGAAACAACAAACCAAGGATGTTCAAAATGAGTTCAATCACAGGCTCGTCCAGATTATTACTCAATTGAAGGAACAGGGACTAAATACCGAGTTGTATTATAAAAACAAGGAAATGGGAGAAACATTCAACATTGTACCTACAAGTGCAATAAGTGGTGAAGGAATCCCTGATTTGTTGTTACTGTTGGTTCAATGGACCCAAAAAACAATGGCTGAAAAACTTACTTATAGTGATGAAGTGCAGTGCACTGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGACCAAATAGTTGTCTGTGGAATGCAGGCAAGTGGGCCAATTGTAACAACAATTCGAGCTTTACTCACACCGCATCCAATGAAGGAACTCCGTGTTAAGGGTACATTTCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAACTGGTTTATATGTTGTGAAGCCTGATGATGATTTGGACGATATTAAAGAATCTGCAATGGAAGACATGCGATCAGTCATGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTACAGGCATCTACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTAAAAACACCAGAAGTGAATATTCCCGTTAGTGGTATAAGCATTGGCCCTGTGCATAAAAAGGATGTTATGAAGGCAAGCGTAATGCTTGAAAAGAAACGAGAATATGCCGCTATATTGGCATTTGATGTCAAAGTCACTCCCGAGGCTAGGGACCTTGCAGAAGAACTGGGTGTGAAAATTTTTATCGCTGATATCATTTATCATTTGTTTGATCAATTTAAGGCCTATATCGATAACATTAAGGAAGAGAAAAAGAAGGAATCTGCCGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAACTGTGTTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTTCTTGAAGGCATTGCAAGGATTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGATATTGGCCGCATTGCCTCCATTGAAAATAACCACAAGCCAGTTGATTATGCAAAGAAGGGGCTCAAAGTAGCTATTAAGATTGTTGGTAGCAATCCTGAGGAGCAACAGAAAATGTTTGGGAGGCATTTTGAGATAGATGACGAACTTGTAAGCCATATTTCGCGGAGGTCTATCGACATACTCAAAGCTAATTATCGGGATGATCTAAGCACTGAAGAATGGAGGCTTGTTGTGAAATTAAAGAATACTTTGAAGGGTTCATGTGAGGAAGTGGTTGGATCCACCATGGAGACCAATAAAGATGTTGCAATGACTAAGATAAGGAGCATTGAAAGTAAATGGTTTGTGGTATACACAGAAGCAAAAAAGTCCCTTACAAAAGATGCCGCAAGAAGAGGAACCATTGCACCAACCGAGAACGCAAAAGCTGATGCTGCCGCTGCTTGCAAAGGGTTCGAAACAAACTCACCAATGGCCATGCTACATGCCCCTGCCACAAGGCCTGCGAAACCCGACAACACCATGGCCTTCATGTCTTCCCTCACTGCTCCCACTCCCATCATCAGAGCCGCCGTCGACACCAACCCGTCGTTCGCTCCCAGCACTGCTGCACGCAACCACTGGGATCTTTTTGAGTAA 4461 0.4459 MGRKKPTARDDDNVPAASQGGGKSKKKVVVDDNEYDIGDLSEEPQPVAPPAAKKKGKKDNAKAKAKGKDDEEDDDDVAISAAGDDDEDEDAGIVFAGKKKKGKSKKGGGGSVFAAASGFGLLGDDDGDGGDDEDDDKSGITGEGGDAKEEEEDEEAVVSFTGKKKPSKGSKKGGGSVFSASAFDAIDDGDNDGGEEDELVVSFSGKKKPSKGSKKGSSFSASAFDDGEEVVDSGGGEDEPVIAFTGKKKSSKGGRKGGVAAFSAASFGDIDDGEEAKNEKEEDEDGKDMPITFSGKKKKSSKSTKKASFSSAFADEEDDSVAEPTRDGEDEDDVLVAFSGKKKSSKKKTSAKPCDETVEPEQPSVGVSSADVDNNVNKSGVTETSKNKKKKKNKSGRTAQEEEDLDAILAELEETVESAAAKKKKKKKEKEKEKKAAAAAAAAAGTAAENEAKEVKAEPAEAKKNDSKAKAVDNKKIPKHVREMQEALARRKEAEERQKKELEERLRKEEEERRRQEELERQAEEARRRKKEKEKEKLQRKKQEGKLLTGKQKEEARRLELMRKQFLNSTGGVTVPGGDSGAPAKRPIYQTKKSKPTHHQQNGAAAPATAAVETAESLEAKEETVTDAGSDEPEKVEETVVEQVEEKVEPLEAAEDNGVDDDEEEDEWDAKSWDDVNLNAKGAFADEDSELVPVAKKETKTAVTMNNAAATKKTISKPVTEEIIDRKLVADKNNSEPPKSVLPREPITQSKEMQKSSVSPKPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIIKAMKQQTKDVQNEFNHRLVQIITQLKEQGLNTELYYKNKEMGETFNIVPTSAISGEGIPDLLLLLVQWTQKTMAEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQASGPIVTTIRALLTPHPMKELRVKGTFLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLDDIKESAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDVLEGIARIGTPICIPSRDFIDIGRIASIENNHKPVDYAKKGLKVAIKIVGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDDLSTEEWRLVVKLKNTLKGSCEEVVGSTMETNKDVAMTKIRSIESKWFVVYTEAKKSLTKDAARRGTIAPTENAKADAAAACKGFETNSPMAMLHAPATRPAKPDNTMAFMSSLTAPTPIIRAAVDTNPSFAPSTAARNHWDLFE 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03283 1486 MobiDBLite consensus disorder prediction 125 139 - -
Aip09g03283 1486 Coils Coil 402 441 - -
Aip09g03283 1486 Gene3D - 762 989 IPR027417 -
Aip09g03283 1486 PRINTS GTP-binding elongation factor signature 835 845 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 PRINTS GTP-binding elongation factor signature 851 862 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 PRINTS GTP-binding elongation factor signature 771 784 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 PRINTS GTP-binding elongation factor signature 887 896 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 Gene3D Translation factors 1224 1359 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 451 562 - -
Aip09g03283 1486 TIGRFAM small_GTP: small GTP-binding protein domain 772 925 IPR005225 GO:0005525
Aip09g03283 1486 MobiDBLite consensus disorder prediction 72 91 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 362 382 - -
Aip09g03283 1486 Gene3D - 1113 1217 IPR036925 -
Aip09g03283 1486 Pfam Elongation factor Tu domain 2 1006 1083 IPR004161 GO:0005525
Aip09g03283 1486 MobiDBLite consensus disorder prediction 726 765 - -
Aip09g03283 1486 CDD IF2_aeIF5B_IV 1232 1327 - -
Aip09g03283 1486 CDD IF2_eIF5B 770 980 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 418 675 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 1 404 - -
Aip09g03283 1486 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1359 - -
Aip09g03283 1486 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1359 IPR015760 -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 655 671 - -
Aip09g03283 1486 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1094 1223 IPR036925 -
Aip09g03283 1486 SUPERFAMILY Translation proteins 1228 1357 IPR009000 -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 52 71 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 616 654 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 316 330 - -
Aip09g03283 1486 Pfam Elongation factor Tu GTP binding domain 771 979 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 Gene3D Translation factors 990 1112 - -
Aip09g03283 1486 CDD aeIF5B_II 991 1103 - -
Aip09g03283 1486 Pfam Translation-initiation factor 2 1098 1210 IPR023115 -
Aip09g03283 1486 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 767 983 IPR000795 GO:0003924|GO:0005525
Aip09g03283 1486 MobiDBLite consensus disorder prediction 270 295 - -
Aip09g03283 1486 Coils Coil 477 548 - -
Aip09g03283 1486 MobiDBLite consensus disorder prediction 747 764 - -
Aip09g03283 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 768 1060 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03283 Aip-Chr9 138951754 138960451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03283 234 1359 Eukaryotic Initiation Factors Gene Family AT1G76810 64.129 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03283 K03243 - gmx:100814875 1485.7