Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03280 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATGCAAGGTGGGGCTTCTTTTGGTGGTTTTGATTTGCCCGGTTCGATTCGGGTTCATCACCAGGGACAGCATCCTCATACCATGCATCAACAACATCAAAATCTTCCGCGGCAAGGGTCCTCGGTTCATGAGGGTTTTCCACTTACAATGGGGAACTTACAGGGCTGTGATCAAACCATTTCGCTGACAGACTTTGGTAAGGGAGAAAGAAGCAAAAACTCGGCAAGCGAGGAAGATGAGCCGAGCTTTAATGAAGAAGGTGGTGATGGTCACCATGAAGCTGGTAGAGGGAAAAAGGGATCGCCTTGGCAGCGAGTGAAGTGGACCGATAAGATGGTAAGGCTTCTCATAACAGCTGTTTCTTACATAGGAGAGGATGGAAGTTCGGATGGCGGTGGTGGAGGAAGAAGGAGATTTGCCGTCCTACAGAAGAAAGGTAAGTGGAAGTCTGTTTCTAAGGTCATGGCCGAAAGGGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAGTTTAATGATCTTAATAAAAGGTATAAGAAGCTTAATGATATGCTTGGAAGGGGCACTTCTTGTCAGGTTGTTGAGAATCCCACACTTTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACACCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGGCTGCATTTACCCCATGATCCTGCGCTGCAGCGATCACTGCAGTTAGCACTTCGAAATAGGGATGATCATGATAATGATGATTTGAGAAAGTCCCATCATGATGATCATGACGAAGATGATCAAGATGCCGAATTCGATGATCATGATGACTTCGAAGAGAACTATACTTCCCATGGAGATAGTAGAGGAGCATATGGGTCTATGAAGAAATTGAAACAAGGACACTGCCAAGAAGATTCTACTAGTTTTGGTAACTCTTTAAATTGTCAGCACTACAGCAAAAGTTCTTATCCCCATGGACAGATGGTCCAATCCGATGTGAATCAAGGTTTACCCGAAAGCGTGCGAACAGCTTGGTTTCAGAAGCAATGGTTTGAATCTCGCTCGCTTCAGCTTGAAGAACAAAAGCTACAGATACAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTAAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGTTGGAGAAACTGAGTCTGGAAAATGAAAGGATGAAGCTTGAGAACGAACGCATCGCTTTAGAACTGAAACGGAAGGAAATCGGCGCTGGCTTTAACTAG 1326 0.4389 MEGNLSQGGLMQGGASFGGFDLPGSIRVHHQGQHPHTMHQQHQNLPRQGSSVHEGFPLTMGNLQGCDQTISLTDFGKGERSKNSASEEDEPSFNEEGGDGHHEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSDGGGGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDLRKSHHDDHDEDDQDAEFDDHDDFEENYTSHGDSRGAYGSMKKLKQGHCQEDSTSFGNSLNCQHYSKSSYPHGQMVQSDVNQGLPESVRTAWFQKQWFESRSLQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEIGAGFN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03280 441 MobiDBLite consensus disorder prediction 73 113 - -
Aip09g03280 441 MobiDBLite consensus disorder prediction 80 113 - -
Aip09g03280 441 MobiDBLite consensus disorder prediction 16 60 - -
Aip09g03280 441 MobiDBLite consensus disorder prediction 268 284 - -
Aip09g03280 441 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Aip09g03280 441 PANTHER FACTOR, PUTATIVE-RELATED 1 441 - -
Aip09g03280 441 MobiDBLite consensus disorder prediction 268 312 - -
Aip09g03280 441 Gene3D - 118 190 - -
Aip09g03280 441 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Aip09g03280 441 Coils Coil 403 435 - -
Aip09g03280 441 Coils Coil 373 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03280 Aip-Chr9 138927696 138930131 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip09g03280 Myb_DNA-bind_4 4.4e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03280 - - pvu:PHAVU_007G079600g 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03280 09 138927696 138930131 Aip09g03280 09 138927696 138930131 ECH
Aip05g03975 05 147998464 148000447 Aip09g03280 09 138927696 138930131 PCT