Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03255 ATGGCTCAATTTTCTATGCCGATTTTAGATGCTGTGCTTGCAAGAGTTGCAACAGAGAAGAGGATGTCAATGATCAAAGCTTGGGAAGAAAGTGAGAAATCAAGAGCAGAGAACAAAACTCAGAAGAAGCTTTCATCCATTTCATCATGGGAGAACAATAAAATAGCTTCCACGGAGGATGGACTGAAAAAGATTCATGAAGCTAACGAAAACTTGGATGAAGTGGTAGCTCTTGCTAAAGACCTTCGTCAAAGAATAGTGGAGAATAAACACTACCCTCCATACCTGAATGATGATATATGGCGTTTGGAGAAAATTGCAAAGGATGGAAAAATCCACAAGCGGGTCTCTTCCCATGGAATTCACACTGTTAAGGATCTCCTACAACTATACACAACCGAACCATCTTCATTATATGTGGCGGAGAGAAAGCACAACTGTACAGATGTTGAAGACTTGTTCATAGCTCACATTGTTGAAATGGACACAATGGCTCGTGGATTCAAGAATGCTGCTAAGTTAATTGAGGTTAGTGTTGAGCATCATAGTCAGCCCTTAACATGA 564 0.4043 MAQFSMPILDAVLARVATEKRMSMIKAWEESEKSRAENKTQKKLSSISSWENNKIASTEDGLKKIHEANENLDEVVALAKDLRQRIVENKHYPPYLNDDIWRLEKIAKDGKIHKRVSSHGIHTVKDLLQLYTTEPSSLYVAERKHNCTDVEDLFIAHIVEMDTMARGFKNAAKLIEVSVEHHSQPLT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03255 187 Coils Coil 65 85 - -
Aip09g03255 187 PANTHER OS02G0177800 PROTEIN 79 139 IPR012416 GO:0005516
Aip09g03255 187 Pfam Remorin, C-terminal region 20 70 IPR005516 -
Aip09g03255 187 Gene3D - 108 184 - -
Aip09g03255 187 PANTHER CALMODULIN-BINDING PROTEIN 79 139 - -
Aip09g03255 187 Pfam Calmodulin binding protein central domain 96 139 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03255 Aip-Chr9 138493170 138495280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03255 55 130 Calmodulin-binding Proteins AT5G57580 43.421 7.33e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03255 - - vun:114190643 93.2041