Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03250 ATGTTGGACTGCATAATACACGACATGAGATCTACGCATCCCCTCCACCACTCTGTCTTCGCTGGGGGCAGCTCCTCCGCGTATGCCCAGGCTGACGGCATAGCCCACATCGCTTCGGCTGACTTCAGTCATCTTCGTCCCCGCAACCGCAGCACTTCGACCCAATACCTACGCTACGGCCACGGTTCACCGGAAAACCTCTTATCCGGCGCCGGAGAGGGGCTTCTCTTCCAACAGGAAACTGATATTGATAGTATTGGAGGATCTTTTGTCCCGTTTGTGCTGCCACAGGTTGTAAGCATTTCAGCAGTTACTCGGATGGATCCTAATGTAGAAGAAGAGTTGCCCCAATACATACATATAAATCAGAATGAATTTTTTATACGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGATTGCAAATATAATGTTGACGACCCTGATAGTGCATGTGGGGACAGCTGCCTCAATGTTTTAACCAGCACCGAATGCACTCCTGGTTATTGCCCATGTGGTGACCTCTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGTTGGGGTCTTTTGGCTGATGAGAACATTAAGGCGGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAATTCAAGGTCTAACAGATGCATTTATCATTTGCCTTAATGCCTCTGAATCTATTGATGCAACAAGAAAGGGAAGTCTTGGCAGATTTATAAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGCGAAATAAGAGTTGGAATATTTGCGAAATATGATATTCCTTTTGGAGCTGAATTGGCATATGACTATAATTTTGAATGGTTTGGGGGCGCAAAGGTTCGCTGCCTCTGCGGTGCAGCTAGATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTCCAACAGGAAGATACTTATCTATGGGAAGATGATGATGACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCCGCGGAGGATGAATTGGGGACAGAAGTTCTTAAACGTATGAACTCAGACAGCTCTGGAAATGATTTTAATGGAAGAATAGGATCCTCCGTGGATAATACAATGAAAGCTGAGCAGCTACCAGACTCTGGTGCTTTCAGTATTCCCCTTAATTTGGCCCAGATGAAGGATTTAGACGTCAAGAAGATTAAAACTGAAGTAGTAAACGAGGATATGAAATTGGATTCTGAAGATACTGAACAGGCCTTCTCCCAAAAGAATGCAATGATCTCGCGTATCCGAAGTAATAGTGCTGCCAGAAACTATCACCTTGGACCTGGGTCCATGTCTAATAAACGATCCAAGGCATATCGTGGCAGAAAGTTAAAGAATCTTGTTCAGAAGAAAGTTGATGCCAAGTTTGCCGCCGGACTCTTGGCTTCAAAGGAAGCACAAGAGGAGATTCTAAAATATGAGGAAGTCAAGAATAACGCTACTTCTGGTCTCGATTCCTTATACGATGAAATAAGGCCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACCTCTGTAGCAGAGAAGTGGATTCAAGCTTGCTGCCTAAAATTGAAGGCAGAGTTTGATCTTTACTCCTCAATTGTCAAAAATGTGGCTTGCACTGCTCAAAGGTCTAAACCTCCCTCAGAAGCTGATAATGAAAACGAAATTAGGCTGTTGATGGGTTGA 1797 0.4346 MLDCIIHDMRSTHPLHHSVFAGGSSSAYAQADGIAHIASADFSHLRPRNRSTSTQYLRYGHGSPENLLSGAGEGLLFQQETDIDSIGGSFVPFVLPQVVSISAVTRMDPNVEEELPQYIHINQNEFFIRRHKKQKEEDIAICDCKYNVDDPDSACGDSCLNVLTSTECTPGYCPCGDLCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFVIEYCGEVISWKEAKRRSQAYEIQGLTDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKYDIPFGAELAYDYNFEWFGGAKVRCLCGAARCSGFLGAKSRGFQQEDTYLWEDDDDRYSVEKIPVYDSAEDELGTEVLKRMNSDSSGNDFNGRIGSSVDNTMKAEQLPDSGAFSIPLNLAQMKDLDVKKIKTEVVNEDMKLDSEDTEQAFSQKNAMISRIRSNSAARNYHLGPGSMSNKRSKAYRGRKLKNLVQKKVDAKFAAGLLASKEAQEEILKYEEVKNNATSGLDSLYDEIRPAIEEHERDSQDSVSTSVAEKWIQACCLKLKAEFDLYSSIVKNVACTAQRSKPPSEADNENEIRLLMG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03250 598 SMART set_7 190 313 IPR001214 GO:0005515
Aip09g03250 598 Gene3D SET domain 98 346 IPR046341 -
Aip09g03250 598 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 108 540 - -
Aip09g03250 598 MobiDBLite consensus disorder prediction 578 598 - -
Aip09g03250 598 PANTHER SET DOMAIN PROTEINS 108 540 - -
Aip09g03250 598 ProSiteProfiles SET domain profile. 190 307 IPR001214 GO:0005515
Aip09g03250 598 ProSiteProfiles Post-SET domain profile. 314 330 IPR003616 -
Aip09g03250 598 SMART shorttest3 137 189 IPR006560 GO:0005634|GO:0018024
Aip09g03250 598 Pfam SET domain 201 307 IPR001214 GO:0005515
Aip09g03250 598 SMART PostSET_3 314 330 IPR003616 -
Aip09g03250 598 Pfam AWS domain 149 187 IPR006560 GO:0005634|GO:0018024
Aip09g03250 598 SUPERFAMILY SET domain 114 327 IPR046341 -
Aip09g03250 598 ProSiteProfiles AWS domain profile. 137 188 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03250 Aip-Chr9 138328436 138334157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03250 172 329 C2H2 Transcription Factor Family AT2G23740 34.807 1.61e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip09g03250 SET 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03250 - - lang:109335575 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03250 09 138328436 138334157 Aip09g03250 09 138328436 138334157 ECH