Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03246 ATGGGGTGTGTTCAGGGCAAGACACTTGAAGGTGCTGCTCATGAACCCAAGGGACTAGACAGGCTCAAATTGGAAAATGGGTATGTGTCAAATTCTGATTTTGTTGCTCACAGAAGATCCACTGGTCAAAAGTATGAACCTATGCAGGATGCTAATGGTAGGCATCATCATCATCAGAAGAGAGAACAACCTCAACCCAGAAACCTTGCAAGAGTTAATGAGCTTGCTTCTGTTCCTGGCGGCAACAATGGTGAAAGTGGCAAGGGGAAAGGGGGTGTTACTAGAGAGAGGAAGAAGAGAGAATTGGCAAAGAAGAAGACTTTTGAGGATGACTATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAATGTTCCTCCTCAAGTCTTTGGTGGATTGGTCCCAAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACATACAGCAATGTGTATAAAGCTCTAGATCGGGACACCGGAGAAATTGTTGCTCTAAAAAAGGTCCGCTTCAATACATCAGAGCCCGAAAGCATTAAATTTATGGCAAGAGAAATCTTGATAATACAAAGATTGGATCATCCCAATGTGCTAAAACTTAAAGGATTAGCCACTTCAAGAATGCAATACAGTATATATCTAGTTTTTGACTTCATGCAAACGGATTTGACAAGAATTATCTCTCATTCTGGAGAGAGGCTAACCGAGCCGCAGGTCAAGTGCTATATGCAGCAATTGCTTTCTGGTCTGCAGCATTGCCATGAGAGGGGAATTTTACATCGAGATATAAAGGGATCAAACCTTTTGATTGATAGAAATGGAATGCTTAAGATTGCAGATTTTGGGCTAGCCAACTATTATAGTCCAAACCATGAGCATCCTCTCACAAGCCGGGTCGTGACACTGTGGTATAGAGCCCCTGAGTTGCTGTTAGGTGCCACGGATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGCCTCCTTGCAGAAATGTTCACCGGAATTCCACTCATGCCTGGCCGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGATTATGTGGCACACCATCAGAGGAGTACTGGAAAAAATTTAAAATATCTGCATCATTTAGACCTCCAAGGTCGTATCGACCTAGCTTTCTAGAAACTTTCAGGGATCTCCCTCCATCTTCTTTGGGGCTTTTATGTACCCTCCTTGCTTTGGAACCGGCATTCCGTGGAACTGCATCTAAAGCTCTTAATAATCCGTTTTTCTTTACAAGCCCGTTGGCCTGTGATCTCTCTGGTTTGCCTGTAATCCACAGAGAAGATGATGAACATGATCAAGCCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATACCTGGAGCGTCGCAAGAGTCTAGCTCCCAAGAGGCAGATAGAACATACTGTGTCTAACAAGGAGGATTCAAGAAGGAATGTGGAACCTGAAACTTACATTCCAAGCGAAGAACCGGGTAGCGCAACCATAAGCAGTACCTCATCTAGTGTAAACCCTGGTGTGGCTAAGGAGCAGTTTCCACTTTTGGCTTCAGATAAAAAGGTGGCTCCAAAATACCATCACCATGGCAATGTTGCTGAAATTACAAGGTACCTTCCTCCATTACCCAAGTCAAAACCAAAAGCAACCCAGAATGATGACTACAACAGATTCAGTTTCAGGAGTGCTTCTACCAGAGAATTTAGAAACTTTAAGAAGGAGGACTATTTACTCTTCGAAATTGATTAG 1785 0.4308 MGCVQGKTLEGAAHEPKGLDRLKLENGYVSNSDFVAHRRSTGQKYEPMQDANGRHHHHQKREQPQPRNLARVNELASVPGGNNGESGKGKGGVTRERKKRELAKKKTFEDDYEMVDGWPKWLVDNVPPQVFGGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREILIIQRLDHPNVLKLKGLATSRMQYSIYLVFDFMQTDLTRIISHSGERLTEPQVKCYMQQLLSGLQHCHERGILHRDIKGSNLLIDRNGMLKIADFGLANYYSPNHEHPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGIPLMPGRTEVEQLHRIFRLCGTPSEEYWKKFKISASFRPPRSYRPSFLETFRDLPPSSLGLLCTLLALEPAFRGTASKALNNPFFFTSPLACDLSGLPVIHREDDEHDQAKEQIKYMNSKIRRSRTYLERRKSLAPKRQIEHTVSNKEDSRRNVEPETYIPSEEPGSATISSTSSSVNPGVAKEQFPLLASDKKVAPKYHHHGNVAEITRYLPPLPKSKPKATQNDDYNRFSFRSASTREFRNFKKEDYLLFEID 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03246 594 MobiDBLite consensus disorder prediction 469 497 - -
Aip09g03246 594 Pfam Protein kinase domain 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03246 594 ProSiteProfiles Protein kinase domain profile. 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03246 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Aip09g03246 594 MobiDBLite consensus disorder prediction 34 100 - -
Aip09g03246 594 Gene3D Transferase(Phosphotransferase) domain 1 225 487 - -
Aip09g03246 594 PANTHER CYCLIN-DEPENDENT KINASE 1 536 - -
Aip09g03246 594 SMART serkin_6 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03246 594 PANTHER CELL DIVISION PROTEIN KINASE 1 536 - -
Aip09g03246 594 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524
Aip09g03246 594 MobiDBLite consensus disorder prediction 503 518 - -
Aip09g03246 594 MobiDBLite consensus disorder prediction 469 518 - -
Aip09g03246 594 MobiDBLite consensus disorder prediction 39 67 - -
Aip09g03246 594 Gene3D Phosphorylase Kinase; domain 1 133 224 - -
Aip09g03246 594 SUPERFAMILY Protein kinase-like (PK-like) 137 428 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03246 Aip-Chr9 138288539 138292091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03246 127 459 Core Cell Cycle Gene Families AT5G10270 44.729 9.61e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aip09g03246 Pkinase 1.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03246 K08819 - gmx:100776854 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03246 09 138288539 138292091 Aip09g03246 09 138288539 138292091 ECH