Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03240 ATGAGCTCCAAAGATCCCCACACTGATTCACTTGATGCATTGAAGTTTAAAATGTCTGCCCGAAAGGATTCAGATAAGTTCTTCATGTCCATCAGCGAAAGAGAGAAAAAGCCATTTGATGTTTTACGTGCTTTGTACGATGGTTGCATTGCTGGAGGTGTTGCCGGAGTCATTGTAGAAACAGCTTTGTACCCCATTGATACCATCAAAACTCGATTACAGGTTGCTCGTGGTGGAGGGCAAATTATCTTGAAAGGTCTATATTCAGGGTTGGCTGGAAATCTTGCTGGTGTCTTACCAGCATCTGCGATTTTTGTTGGTGTGTATGAACCCACAAAGCAAAAATTGCTACGGTCCTTTCCTGAGAATCTCAGTGCCATAGCTCATTTTGCTGCAGGTGCTATTGCAGGAGCTGCATCTTCTCTTGTTCGTGTTCCAACTGAGGTTATTAAGCAAAGGATGCAAATGGGTCAATTTAAATCAGCACCAGCTGCTGTGCGTCTTATCGTTGCCAATGAAGGTTTTAAAGGTCTTTATGCGGGATATGGGTCTTTCTTATTGCGAGATCTACCATTCGATGCCATACAATTCTGTATCTATGAGCAGCTCCGGATCGGTTATAAGCTAGCAGCAAAAAGAGACCTAAAGGATCCAGAAAATGCTATGCTCGGGGCGTTTGCTGGTGCCATAACTGGAGCAGTAACAACACCTCTTGATGTAGTAAAAACAAGACTAATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTATGATTGTGTCAACACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATGGGGCCAAGAGTGTTGTGGATAGGAATTGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAATTCTTGCTCAGAAGCATCCAAAAGCTTAG 930 0.4215 MSSKDPHTDSLDALKFKMSARKDSDKFFMSISEREKKPFDVLRALYDGCIAGGVAGVIVETALYPIDTIKTRLQVARGGGQIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLRSFPENLSAIAHFAAGAIAGAASSLVRVPTEVIKQRMQMGQFKSAPAAVRLIVANEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLKDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGSQNHYKGIYDCVNTIVKEEGTHALFKGMGPRVLWIGIGGSIFFGVLEKTKKILAQKHPKA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03240 309 Pfam Mitochondrial carrier protein 219 305 IPR018108 -
Aip09g03240 309 Pfam Mitochondrial carrier protein 48 118 IPR018108 -
Aip09g03240 309 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Aip09g03240 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Aip09g03240 309 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 3 307 - -
Aip09g03240 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 307 - -
Aip09g03240 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Aip09g03240 309 Gene3D Mitochondrial carrier domain 24 309 IPR023395 -
Aip09g03240 309 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Aip09g03240 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 115 IPR018108 -
Aip09g03240 309 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Aip09g03240 309 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Aip09g03240 309 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Aip09g03240 309 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03240 Aip-Chr9 138213315 138217118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03240 132 307 Chloroplast and Mitochondria Gene Families AT1G07030 32.787 1.27e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03240 K15111 - gmx:100800051 478.018