Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03237 ATGTTCAAGATTGCACTCAAGGAGTGCAGGCACGTGTTTAAGAATCTCGTCTCCATTGTTAATGTTGGTGGTGTCTCCAAGCTTATTCATCAAGAGTTTCCGCAGTTGAAGTGCACCATTTTCGACCAGCCAGAGGTTGTTAGTAACCTCAAAGGAGATGGGAATTTGAACTTTGTTGCCGGTGACATGTTCAAATCGATCCCTTCTGCTGATGCAGTTTTACGGCGGTGA 231 0.4502 MFKIALKECRHVFKNLVSIVNVGGVSKLIHQEFPQLKCTIFDQPEVVSNLKGDGNLNFVAGDMFKSIPSADAVLRR 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03237 76 Gene3D Vaccinia Virus protein VP39 1 76 IPR029063 -
Aip09g03237 76 PANTHER O-METHYLTRANSFERASE 1 74 IPR016461 GO:0008168
Aip09g03237 76 Pfam O-methyltransferase domain 6 74 IPR001077 GO:0008171
Aip09g03237 76 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 1 74 - -
Aip09g03237 76 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 76 IPR016461 GO:0008168
Aip09g03237 76 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 74 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03237 Aip-Chr9 138140280 138140510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03237 13 76 Monolignol Biosynthesis Gene Families AT3G53140 40.580 2.22e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03237 - K22588 aip:107607249 140.584