Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03228 ATGGAACATACTGTTCCAAACAGTGTTATAACTTTGCTGCTATTCTTCTTGTGTCTCACATTAACAAAGATGGAAATGAGTACTTGTCTCTCACCTGATGGACAAGCACTTCTTTCTCTTGTTTCTGCATCTGAAAGATCATCATCGGCATCTTCCTCACTTCTCTCTTCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAAGGGTGTTACATGCTCCCCACAAAGCAGAGTAATTTCCCTTTCTATCCCTGACACTTTCCTCAACCTTACCTATTTGCCTCCCCAGCTTTCTTCTTTGTCAATGCTGCAACTTCTCAACCTCTCTTCCACCAATGTCTCTGGCCAAATCCCTCCCTCTTTTGGTCAACTCTCCCATCTCCAACTCCTTGACCTCTCATCAAACTCTCTAACAGGTTCCATTCCTAATCAACTTGGAAACCTCTCTTCACTTCAGTTCCTTTTCTTGAACTCAAACAAACTCACAGGAACCATTCCTCAGCATCTTGCTGACCTTACCTCACTCCAAGTTCTGTGCCTGCAAGATAATCTCCTTAACGGTTCAATACCATCACAGTTAGGATCATTGAAATCTCTACAGCAGTTTAGGATTGGTGGAAATCCATACCTCACTGGAGAGATTCCATCACAGTTAGGACTACTCACAAACCTCACTATATTTGGTGCAGCTGCCACTGGACTTTCTGGTTCCATTCCCTCTTCATTTGGGAACTTGATCAATCTTCAAACTCTAGCACTTTATGACACTGATGTTTCCGGTTCAATACCACCGGAACTCGGGCTCTGTTCTGAGTTGAGAAATCTTTATTTGCACATGAACAAGCTCACTGGGTCTATTCCTCCTCAGTTGGGGAAGCTGCAAAAGCTCACAGGTGTGCTTCTGTGGGGGAATGCATTATCTGGGTCAATACCAGCTGAGATTTCTAACTGTTCATCACTTGTGGTGTTTGATGCCTCTTCCAATGAACTCACTGGTGAAATACCTGAGGATTTTGGGAAGCTTGTGGTTATGGAACAGCTTCATTTATCAGACAATTCCCTCTCAGGAAAAATACCATGGCAGTTGGGAAACTGCACAAGCCTTGCTACTGTTCAGCTTGACAAGAATCAGTTATCAGGTTCAATCCCTTGGCAGGTTGGGAAGTTGAAATTCTTGCAGAGTTTTTTCTTGTGGGGTAACTCAGTTTCTGGAACCATACCACCCTCTTTTGGGAACTGCACAGAACTCTTTTCGCTTGACCTTTCAAGGAACAAGCTCACAGGTTCAATCCCGGAAGAGATTTTCAGCTTGAAGAAGCTGAGTAAACTCTTGCTTCTTGGAAATTCTTTGACAGGAGAGTTGCCATCAAGTGTTGCAGATTGTGAATCTTTGGTGAGACTACGGCTCGGAGAAAACCAGCTTTTGGGGAACATTCCTAAAGAAATAGGCCAATTACAGAACCTGGTGTTTCTTGACTTGTACATGAATCACTTCTCTGGAAGCTTACCAGTAGAGATTGCCAACATAACAGTTCTTGAGCTCTTAGATGTGCATAACAACCACATAACCGGCGAAATTCCGTCTCAGATTGGGGAGCTTGCAAACTTGGAGCAGCTTGATCTAAGTCAAAACCATTTGACAGGTGGAATTCCTTGGAGCTTTGGAAACTTCAGTTATTTGAACAAGCTCATCCTCAACAATAATTTACTCACAGGATCAATCCCAAAATCTATTAGGAATTTGCAGAAGCTAACTCTTCTTGATTTGAGTTACAACAATCTCTCTGGTGACATACCTTCTGAGATTGGTTATGTTACAAGCTTAACCATTAGTTTGGACTTAAACTCGAATTCATTCACAGGAGAAATCCCAGAGTCAATGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAATATGTTTTATGGAGGAATTAAGGTTCTTGGTTCTCTCACCAGTCTCACTTCCCTCAATATCTCGTACAACAATTTCTCAGGTCCTATCCCAGTCACTCCATTCTTCAGAACTCTTTCTTTTAACTCATGCCTTCAGAACCCCCTTCTATGCCAATCCATTGATGGCAATACATGTTCTTCAAGCCTGATTCAAAGAAATGGTATAAAATCTGCGAAAACCATAGCTTTCGTAACTGTGATTCTAGCTTCAATTGTGATAATTGCTGTTGCATCCTGGATTATAGCAACTCGTAGTAACAGGTATACAGTGGAAAAATCTTTGGGGGCATTGGCTTCCACATCAGGAGCTGAGGATTTCTCATATCCTTGGACCTTTATCCCATTTCAAAAGCTAAACTTCACCATAGATAACATCTTGGATTGCTTGAAGGATGAAAATGTGATCGGGAAGGGTTGCTCCGGTGTTGTCTACAAGTCTGAGATGCCTAATGGGGAGTTGATAGCAGTGAAGAAGCTATGGAAAGCTAGCAAAGAAGATGAAACACTGGACTCTTTCGCCGTAGAGATTCAGATTCTCGGATACATCCGGCACAGAAACATTGTGAGGCTACTGGGCTATTGTTCTAACAGGAGTGTCAAGCTTCTTCTCTACAATTTCATCCCAAATGGTAATCTGAGACAGCTCTTGCAAGGGAACAGGAACTTAGACTGGGAAACCAGATACAAGATTGCTGTTGGAACAGCTCAGGGTCTTGCTTACCTTCATCATGATTGTGTCCCTCCCATTCTTCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAATATGAAGCATATCTCGCAGATTTTGGTCTTGCAAAGCTGATGAATTCACCAAGTTATCATCAGGCAATGTCTAGAGTTGCTGGTTCTTATGGTTATATTGCCCCAGAGTATGGCTACTCAATGAACATAACTGAGAAGAGTGACGTCTACAGTTACGGAGTGGTTCTGCTGGAGATACTAAGCGGGCGCAGTGCCGTCGAATCCCATGTCGGAGATGGACAACACATAGTTGAGTGGGTGAAGAGGAAAATGGGGAGCTTTGAACCAGCTGTGTCAATACTAGACACAAAACTCCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTCCAAACACTTGGAATTGCCATGTTTTGCGTGAACTCTTCGCCATCAGAACGTCCCACGATGAAGGAAGTGGTTGCATTGCTAATGGAGGTGAAGAGCCAGCCTGAAGAGATGGGCAAAACCTCTCAACCTCTAATAAAGCACCCTTCAAATCAAAGCTAA 3246 0.4282 MEHTVPNSVITLLLFFLCLTLTKMEMSTCLSPDGQALLSLVSASERSSSASSSLLSSWNPSSSTPCSWKGVTCSPQSRVISLSIPDTFLNLTYLPPQLSSLSMLQLLNLSSTNVSGQIPPSFGQLSHLQLLDLSSNSLTGSIPNQLGNLSSLQFLFLNSNKLTGTIPQHLADLTSLQVLCLQDNLLNGSIPSQLGSLKSLQQFRIGGNPYLTGEIPSQLGLLTNLTIFGAAATGLSGSIPSSFGNLINLQTLALYDTDVSGSIPPELGLCSELRNLYLHMNKLTGSIPPQLGKLQKLTGVLLWGNALSGSIPAEISNCSSLVVFDASSNELTGEIPEDFGKLVVMEQLHLSDNSLSGKIPWQLGNCTSLATVQLDKNQLSGSIPWQVGKLKFLQSFFLWGNSVSGTIPPSFGNCTELFSLDLSRNKLTGSIPEEIFSLKKLSKLLLLGNSLTGELPSSVADCESLVRLRLGENQLLGNIPKEIGQLQNLVFLDLYMNHFSGSLPVEIANITVLELLDVHNNHITGEIPSQIGELANLEQLDLSQNHLTGGIPWSFGNFSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNNLSGDIPSEIGYVTSLTISLDLNSNSFTGEIPESMSALTQLQSLDLSHNMFYGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSFNSCLQNPLLCQSIDGNTCSSSLIQRNGIKSAKTIAFVTVILASIVIIAVASWIIATRSNRYTVEKSLGALASTSGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKSEMPNGELIAVKKLWKASKEDETLDSFAVEIQILGYIRHRNIVRLLGYCSNRSVKLLLYNFIPNGNLRQLLQGNRNLDWETRYKIAVGTAQGLAYLHHDCVPPILHRDVKCNNILLDSKYEAYLADFGLAKLMNSPSYHQAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPSERPTMKEVVALLMEVKSQPEEMGKTSQPLIKHPSNQS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03228 1081 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Aip09g03228 1081 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Aip09g03228 1081 Gene3D Ribonuclease Inhibitor 387 707 IPR032675 -
Aip09g03228 1081 Gene3D Phosphorylase Kinase; domain 1 769 861 - -
Aip09g03228 1081 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Aip09g03228 1081 PANTHER - 9 1077 - -
Aip09g03228 1081 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Aip09g03228 1081 PANTHER UNNAMED PRODUCT 9 1077 - -
Aip09g03228 1081 SMART serkin_6 784 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03228 1081 Gene3D Transferase(Phosphotransferase) domain 1 862 1075 - -
Aip09g03228 1081 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Aip09g03228 1081 Pfam Leucine rich repeat 393 451 IPR001611 GO:0005515
Aip09g03228 1081 Pfam Leucine rich repeat 536 595 IPR001611 GO:0005515
Aip09g03228 1081 Gene3D Ribonuclease Inhibitor 286 386 IPR032675 -
Aip09g03228 1081 SUPERFAMILY Protein kinase-like (PK-like) 767 1056 IPR011009 -
Aip09g03228 1081 MobiDBLite consensus disorder prediction 1062 1081 - -
Aip09g03228 1081 SUPERFAMILY L domain-like 55 404 - -
Aip09g03228 1081 MobiDBLite consensus disorder prediction 1064 1081 - -
Aip09g03228 1081 SMART LRR_typ_2 631 658 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 534 557 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 125 148 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 582 606 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 149 172 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 294 318 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 414 438 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 486 509 IPR003591 -
Aip09g03228 1081 SMART LRR_typ_2 173 197 IPR003591 -
Aip09g03228 1081 Pfam Protein kinase domain 786 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03228 1081 PRINTS Leucine-rich repeat signature 128 141 - -
Aip09g03228 1081 PRINTS Leucine-rich repeat signature 534 547 - -
Aip09g03228 1081 SUPERFAMILY L domain-like 372 701 - -
Aip09g03228 1081 Gene3D Ribonuclease Inhibitor 192 285 IPR032675 -
Aip09g03228 1081 ProSiteProfiles Protein kinase domain profile. 784 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03228 Aip-Chr9 138051545 138055597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03228 29 1075 Receptor kinase-like Gene Family AT5G56040 44.444 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip09g03228 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03228 - - gmx:100819611 1759.96