Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03209 ATGGGGATATCTTCAACCACCTTAGACACAAATTGGTGGGTGCTTACACTCCCAGCCATACTAGGAACACAAAATAACATGCTTAACAATCTAATCTTTGTAGCCTCAATTGCACTTCTCTCCATTGGAATTTTAGTATGGGCATTCCCAATGGGAGGAGTAGCTTGGCGAAACGGCCGGAACCAAATGGGCCCTGTCCCAATTCCAGGGCCCAAAGGGTTCCCAATCTTTGGTATCTTATTCAGCTTGAACCATGGCCTTCCACACCGAACCCTAGCTTCCATTGCTTCCACCCTCTCCGCTACACAACTCATGGCCTTCAGCTTAGGCTCCACACCTGCAGTTATCACCTCAAATCCTAACATGGCACGCGAAATCTTGAATTCGCCCCATTTTGCGGATCGTCCCATTAAAGATTCCGCAAAGAGCCTCATGTTCAGTCGCGCCATTGGGTTTGCACCCAACGGCTCATACTGGCGTTTACTTCGAAAGATTGCATCCATTCATCTCTTTTCTCCTAGGCGCATCGCGGCCCATGAGGCTGGTCGCAGGCATGATTGCGCCGCCATGTTGCAAGCTGTGGCTCAAGAACAATCACAAAATGGGGTTGTTTTCCTAAGAAAACACCTCCAAGATGCGGCTCTTAACAACATTATGGGAACCGTCTTTGGAAAAAGATACAACATGGAAGAACAAAACCAGAATAGCGATCACCAAGTTGAGGAGCTTCGTGAGATGGTGAGGGAAGGGTTTGAGCTCTTAGGAGCTTTCAACTTGTGTGATTATGTTCCATGGATGAGGTTCTTCTACGACCCTTTTCACATCAAGGAACGGTGTTCCGCTCTTACTCCTCGCGTAAAGAGGTTTGTGAAGAGGGTTTTGGATGAACATCGATTGGGTCAGGACAAGAAGATTATTTCTGATGGATCAGACTTCGTGGATGTGCTGCTCTCGTTGGAAGGGGATGAAAAGCTCCAAGATGACGATATGATTGCGGTTTTATGGGAGATGATATTCCGTGGCACAGACACAACAGCACTTGTAACCGAGTGGGTAATGGCGGAACTTGTTTTCAACCAAGAAATTCAGACTAGGCTTCGCAATGAGCTTCACAATTCTCTTGGGGACAAGAACAACATTACAGATGCTGACGTGGCAAAACTAACATATCTTGAGGCCATTGTGAAAGAGACTTTGCGATTGCACCCAATTGGTCCACTCCTTTCATGGGCCCGCTTGTCCACATCAGATGTCCAGCTCAGCAACGGCATGGTGGTCCCATTGAACACCACAACAATGGTGAACATGTGGGCCATAACTCACGACCCCAACGTGTGGGAGGATCCATTGGAGTTTAAACCTGAGAGGTTTTTGAAGGCTCAAGGAGGCATTGACTTTGACATAAGGGGCGTTGACCTTAGGCTTGCACCGTTCGGTGCCGGGCGTAGGGTTTGCCCCGGCAAGAACCTTGGCCTTGCCACTGTGACCCTTTGGGTGGCTAAGTTGGTTCACCGGTTTGAATGGCTGCAAGACATGGCTAACCCTGTTGACCTAACCGAAGTGCTCAAGCTTTCTTGTGAAATGAAAACCCCTCTAAAGGTTGTGGCTATTCCAAGGGTTGGTTAA 1626 0.4822 MGISSTTLDTNWWVLTLPAILGTQNNMLNNLIFVASIALLSIGILVWAFPMGGVAWRNGRNQMGPVPIPGPKGFPIFGILFSLNHGLPHRTLASIASTLSATQLMAFSLGSTPAVITSNPNMAREILNSPHFADRPIKDSAKSLMFSRAIGFAPNGSYWRLLRKIASIHLFSPRRIAAHEAGRRHDCAAMLQAVAQEQSQNGVVFLRKHLQDAALNNIMGTVFGKRYNMEEQNQNSDHQVEELREMVREGFELLGAFNLCDYVPWMRFFYDPFHIKERCSALTPRVKRFVKRVLDEHRLGQDKKIISDGSDFVDVLLSLEGDEKLQDDDMIAVLWEMIFRGTDTTALVTEWVMAELVFNQEIQTRLRNELHNSLGDKNNITDADVAKLTYLEAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMVVPLNTTTMVNMWAITHDPNVWEDPLEFKPERFLKAQGGIDFDIRGVDLRLAPFGAGRRVCPGKNLGLATVTLWVAKLVHRFEWLQDMANPVDLTEVLKLSCEMKTPLKVVAIPRVG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03209 541 Pfam Cytochrome P450 69 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 Gene3D Cytochrome P450 56 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 PANTHER CYTOCHROME P450 78A7-RELATED 1 539 - -
Aip09g03209 541 SUPERFAMILY Cytochrome P450 68 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g03209 541 Coils Coil 226 249 - -
Aip09g03209 541 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 1 539 - -
Aip09g03209 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03209 Aip-Chr9 137745845 137748451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03209 9 535 Cytochrome P450 AT5G09970 64.906 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03209 K20619 - pvy:116124806 763.451