Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03190 ATGGAGCCTGTCGTCTCTGCTTCCACTTCAGCCACCAAGCCTCCTCCTGAAGTGCAGGCAGCGGAGGCAACCGCCACCATGCAACCTGCCCCACTGCGCAAGATCATGGCGGTGGCCACCATCGCCACCGGCATACAGTTCGGCTGGGCCCTACAACTCACACTACTCTCACCCTACGTCCAAATACTCGGAACTCCACACATGTGGGTCTCCTTCATCTGGTTCTGCGGCCCTGTCTCCGGCATCCTCGTCCAGCCCCTCGTCGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCCCCGCCGCCCGTTTATCGCCGCCGGAACCCTAGCCGTCGCCTTCGCAGGCTTCTTAATCGCATTCTCTGCCGACATCGGCCACCTCCTCGGCGACGAACTAGTCGCCACCGGAGAGGAGCACAAAATCCGTCCGCGCACCATCGGCCTCGTCATCCTCGGCTTCTGGATCATTGACTTCGCCAACAACATGCTCCAAGGACCGTGCCGCGCTCTCCTGGCCGACCTCGCTGCGGGGAATCAAAGCAAAACGAAAACCGCGTACGCACTCTACACGCTCTTCATGGCGGTCGGAAACGTTCTGGGCTCCGCCGCCGGGTCCTCCGGCGGACTTTACAGAATCCTGCCTTTCACAACGACGAAAGCATGCCACGACGAGTGCGCGGACGTGAAAACGTGTTTTATGATCTCCGTGTTGCTATTGGTTGTTATTGTAACCGTCAACTTGATGTACGTGAAGGAAAAACCGTTAACGGTTTCCATTGGGAAAAGTGAAAAAGGCGGGATGAGAGAATTATTGGGTGCATTGCAGGGGCTTAAGAGGCCGATGCGGATCCTTTTATTGGTGACGTGTTTCAATTGGATTGCGTGGTTTCCGTTTTTTGAGTACAACACTGACTGGATGGGGGTTGAGGTGTACGGAGGGAAGGATAAGGAGCAGAGTGTGTATGATACTGGGGTCCGCGAGGGTGCCACCGGGATGATGGTGAATTCTATTGTGTCTGGTGGCGCGTCCTTGGGGATTGGTGTGTTGGCGCGTGGGCTTGGTGGCGAGAAGAGGCTATGGGGTGTTGTTAACTTCTTGCTAGCCGTTTGTTTGGCCATGACGGTGCCTATCTCCAAGATGGCCAAACATTTGCGGCGGTATGCGGTGGGTGCTGGCGGATCTCTGGAGCCTCTTCCGCCGTCTCGTGGCGTCAAGGCTGCTGCCTTAACTCTCTACGCCGTCCTTGGAATTCCTCTTGCTATCACTTACTGCATACCCTTTGCTCTGGCATCTATATTCTCCACCAACGCAGGAGCAGGACAAGGTCTATCCCTGGCAGTTCTCAATCTTGCAGTTGTCATACCACAGATGTTGATGTCTGCTGTTAGTGGACCATGGGACAAATTGTTTGGTGGCAGTAACCTGCCATCTTTCGTGGTTGGTTCCGTAGCGGCTGCAATCAGTGGCATACTGTCCATAATCTTACTGCCCTCTCCGCCGCCGGACGTCAAGGCTGCAATCACCGGAGGAGGCTTTCATTAA 1548 0.5601 MEPVVSASTSATKPPPEVQAAEATATMQPAPLRKIMAVATIATGIQFGWALQLTLLSPYVQILGTPHMWVSFIWFCGPVSGILVQPLVGYHSDRCTSRFGPRRPFIAAGTLAVAFAGFLIAFSADIGHLLGDELVATGEEHKIRPRTIGLVILGFWIIDFANNMLQGPCRALLADLAAGNQSKTKTAYALYTLFMAVGNVLGSAAGSSGGLYRILPFTTTKACHDECADVKTCFMISVLLLVVIVTVNLMYVKEKPLTVSIGKSEKGGMRELLGALQGLKRPMRILLLVTCFNWIAWFPFFEYNTDWMGVEVYGGKDKEQSVYDTGVREGATGMMVNSIVSGGASLGIGVLARGLGGEKRLWGVVNFLLAVCLAMTVPISKMAKHLRRYAVGAGGSLEPLPPSRGVKAAALTLYAVLGIPLAITYCIPFALASIFSTNAGAGQGLSLAVLNLAVVIPQMLMSAVSGPWDKLFGGSNLPSFVVGSVAAAISGILSIILLPSPPPDVKAAITGGGFH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03190 515 Pfam MFS/sugar transport protein 47 296 - -
Aip09g03190 515 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 508 - -
Aip09g03190 515 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 503 IPR005989 GO:0005887|GO:0008515|GO:0015770
Aip09g03190 515 Gene3D MFS general substrate transporter like domains 32 265 IPR036259 -
Aip09g03190 515 PANTHER SUGAR TRANSPORTER 21 508 - -
Aip09g03190 515 SUPERFAMILY MFS general substrate transporter 35 503 IPR036259 -
Aip09g03190 515 CDD MFS_SLC45_SUC 35 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03190 Aip-Chr9 137351763 137355617 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03190 28 515 Sucrose Transporter Gene Family AT1G71890 57.545 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03190 K15378 - gmx:547679 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03190 09 137351763 137355617 Aip09g03190 09 137351763 137355617 ECH