Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03188 ATGGAGTCTGTCAGTGCCACCAAACTTCATCCTCCTCATGCGGAGGAAGTTCCGGTTGCTCCACCGACTAATCAGCTGTCTAGCCCTCTACGTAAGATCATCACCGTCGCGACCCTCGCCGTAGGCATACAATTCGTGTGGGCCCTACAGCTCACCATACTCACACCCTACGTCCAAATACTCGGAACCCCTCACATGTGGGTTTCCTTCATCTGGCTCTGCGGCCCTATCTCCGGCATCATCGTCCAGCCCCTCGTTGGTTTCTATAGCGACCGCTGCACCTCCCGCTTCGGCCCCCGCCGCCCCTTCATTATCGCCGGAACCCTATCCGTTGTCTTCGCCTCCTTCCTCATCGGCTACGCTGCAGACCTAGGCCATTTCCTTGGTAACTCCGACGAAGCCAACCTCCGCCCTCGCACCATTGCCGTTTTCATCGTCGGCTTCTGGATTATCGACTTTGCCAACAACCTCCTCCAGGGACCGTGCCGCGCCTTCATCGCCGACCTCGCCGCCGGAGACCACAGCAAGACCAGAACCGGTTACGCCTTCTACACGCTCTTCACAGCCGCCGGGAACATCCTCGGCTCCGCGGCGGGATCCTCCGGCGGAATCCACCGCGTGCTACCGTTCACAAAAACGGCATCGTGCGACGAGTACTGCGCGGACGTGAAGACGTGCTTCCTCTTCGCCGTTGCGATTCAGCTAGTGCTGGTAACTGTTACTGTTACGTACGTTAAGGAAAAACCGTTACGAATAACGGATTCAGTTGGAAATGGCGGGAAGGGAGGGATTGGGGAATTATTCGGTGCTTTGCGGGAACTCAAGAGACCAATGTGGATCCTATTGTTGGTGACGTGTTTCAATTGGTTCGCGTGGTTTCCGTTTTTACTGTACAACACTGATTGGATGGGGGTTGAAGTGTACGGTGCGCAGGATAAGAAGGAGAGGGTGTACACTATGGGGATGGCCGAGCATTCTCGGCGGTATACGGTGGCTCATGACGGGGTTCGGGAGCCACTGCCGCCTCCTGCGGGAGTCAAGGCAGCTGCGTTGACTCTTTACTCCTTTCTTGGGCTCCCATTCGCGATTACTTGTAGCATACCCTATACTCTAGCATCTATATTCTCCAGCGCAGCAGGGGCAGGCCAAGGGCTATCCCTTGCAATTCTGAATCTTGCAGTTGTGATACCACAGATGGTGATGTCTGTGGTTAGTGGACCGTTTGATAAACTTTTTGGTGGTAACTTGCCATCGTTTGTGTTGGGTGCTGTGGCAGCTGCAATCAGTGGAATACTATCATTGTTTTTCCTTCCTTCTCCCCCGCCTGATTTCACCAAAGCTGCTGCAACCTCCACCCCTGCTGCCTTCCACTAA 1374 0.5495 MESVSATKLHPPHAEEVPVAPPTNQLSSPLRKIITVATLAVGIQFVWALQLTILTPYVQILGTPHMWVSFIWLCGPISGIIVQPLVGFYSDRCTSRFGPRRPFIIAGTLSVVFASFLIGYAADLGHFLGNSDEANLRPRTIAVFIVGFWIIDFANNLLQGPCRAFIADLAAGDHSKTRTGYAFYTLFTAAGNILGSAAGSSGGIHRVLPFTKTASCDEYCADVKTCFLFAVAIQLVLVTVTVTYVKEKPLRITDSVGNGGKGGIGELFGALRELKRPMWILLLVTCFNWFAWFPFLLYNTDWMGVEVYGAQDKKERVYTMGMAEHSRRYTVAHDGVREPLPPPAGVKAAALTLYSFLGLPFAITCSIPYTLASIFSSAAGAGQGLSLAILNLAVVIPQMVMSVVSGPFDKLFGGNLPSFVLGAVAAAISGILSLFFLPSPPPDFTKAAATSTPAAFH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03188 457 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 336 447 - -
Aip09g03188 457 Pfam MFS/sugar transport protein 40 291 - -
Aip09g03188 457 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 24 322 - -
Aip09g03188 457 CDD MFS_SLC45_SUC 33 435 - -
Aip09g03188 457 PANTHER SUGAR TRANSPORTER 336 447 - -
Aip09g03188 457 SUPERFAMILY MFS general substrate transporter 33 303 IPR036259 -
Aip09g03188 457 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g03188 457 Gene3D MFS general substrate transporter like domains 29 323 IPR036259 -
Aip09g03188 457 PANTHER SUGAR TRANSPORTER 24 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03188 Aip-Chr9 137289384 137291778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03188 23 457 Sucrose Transporter Gene Family AT1G22710 50.301 1.46e-169 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03188 K15378 - gmx:547679 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03188 09 137289384 137291778 Aip09g03188 09 137289384 137291778 ECH