Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03185 ATGTTCCGTTACGACCTCCTCGACGAGACGCAGAACAAGCTCAATTACATCCTCTCTCTCACCGTCGAGAACTTGCTCGAGCGCCGCCTCCATATTCTCGTCTTCAAGTCTGGTATAGCTAAGTCCATCCACCAGCGCTACATTAGTAGCTCAAAATTAAAGCCACAGAGGAGGTTGATTGAGCTGGAGGCTTTGGAGAAAGTCATCCATGAAAGAATAGATGCTCCCGGAGTACCTAGGCAGTGGTGGTTTGGCGGGGGGATTAACTTGACTCCTTCTTACATTTTCGAGGAGGATGTTAAACACTTCCATTCGTTATATTCTCAATGCAAAAAATATTAG 342 0.462 MFRYDLLDETQNKLNYILSLTVENLLERRLHILVFKSGIAKSIHQRYISSSKLKPQRRLIELEALEKVIHERIDAPGVPRQWWFGGGINLTPSYIFEEDVKHFHSLYSQCKKY 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03185 113 SUPERFAMILY Coproporphyrinogen III oxidase 73 108 IPR036406 GO:0004109|GO:0006779
Aip09g03185 113 Gene3D Coproporphyrinogen III oxidase, aerobic 27 113 IPR036406 GO:0004109|GO:0006779
Aip09g03185 113 PANTHER RIBOSOMAL PROTEIN S9, PUTATIVE, EXPRESSED-RELATED 1 46 - -
Aip09g03185 113 PANTHER 30S 40S RIBOSOMAL PROTEIN 1 46 IPR022801 -
Aip09g03185 113 Pfam Coproporphyrinogen III oxidase 77 109 IPR001260 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03185 Aip-Chr9 137190976 137191568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03185 1 44 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 77.273 8.01e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03185 K00228 - adu:107465882 186.808