Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03152 ATGGGAGTTTCTTCACATCCTTTTTCTTCTCTTGTTTCCCTCTCTTTGAATGATCTTGAAGTACTCAATGATCCATCATATTTGTGGAGCAAGGTGAGTGTCAAGGGTAGGAGGCCAAGAACAAGAACAAGAAGGGTTTTGATGAAGAGGATTGGTGGTTCTAGAAGATCAAGAGGAAGAGGAACCAAATCCAATAATGGGATTCAGAGCAGGGTGAGAACATTGAAGAATCTTATACCAAACAGTGACAATAACATGGGTTTGGATGGACTCTTTAGAGAGACAGCAAATTATATATTGTCTTTGCAAAATAGAGTGAGAGTCATGCAGGTCATGGTTAAGGTTTTAACAGGTTCTGGTGGTGATGATGAGTGA 375 0.4 MGVSSHPFSSLVSLSLNDLEVLNDPSYLWSKVSVKGRRPRTRTRRVLMKRIGGSRRSRGRGTKSNNGIQSRVRTLKNLIPNSDNNMGLDGLFRETANYILSLQNRVRVMQVMVKVLTGSGGDDE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03152 124 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 111 IPR036638 GO:0046983
Aip09g03152 124 CDD bHLH_AtIBH1_like 66 113 IPR044549 GO:0006355
Aip09g03152 124 PANTHER TRANSCRIPTION FACTOR UPBEAT1 34 118 - -
Aip09g03152 124 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 34 118 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03152 40 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 49.383 1.95e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03152 - - ccaj:109814433 112.849