Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03147 ATGACACTAACACAAATTCCTGAGAGAGCATCAATGGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCACCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATTAACTCCCTCAAAATTGATCTAGATGTTATAGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGGTATGAAGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCCACTGCAGCTGGATTCTGGAAAGCAACTGGGAGAGACAAGGCTGTTATGTCGAAGAACAGGATCATTGGTATGAGGAAGACTTTGGTCTTCTACAAAGGACGTGCCCCTAATGGCCGCAAAACTGATTGGATCATGCACGAATATCGCCATCAAACCTCTGAACATGGCCCTCCTCAGGCAAAAGGATGGGTTGTATGTAGAGCATTTCGAAAACCAAGTCCAAGTCATCAAAGGCAATTAGGTTATGATCCATGGTGTAGTAATCATCATCATCAACCACATTATTTCAGAGATCAGAGTAGCTATGGTGGAAGGCCCTTATCAATCACAGATCTTCTAACTTCAGAAACTCATCATCATCATCATCTGCTGAATCACCCTACTGAAGGTACAAATTTTAGTCATCCCTTCGGTTCAGATCATCATCATCAACAAGAACAACAAGAGTTTGTAATATCAAATAATCATCAACAACTCATTGAGCTTCCACAGCTAGATAGCCCTACTAGTGCTTCTCTCTCAGCACCACCAACAACAAGTTTTGCAGTCAAAGAATCATCTTCCATTAATAATAACAATGAAGAGTATTGCAGTGATGAGAGGAACAACAACAACAATATTGATTGGAAAAGCTTGGATAACTTGTTTGCTGATACTTCTAATTACTTCTCAAATCCAAACATGTCCCAATTCATGACCATCAATCATCATCTAGGTTGTTTCCCTGGTTCATAA 1023 0.3988 MTLTQIPERASMDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQAKGWVVCRAFRKPSPSHQRQLGYDPWCSNHHHQPHYFRDQSSYGGRPLSITDLLTSETHHHHHLLNHPTEGTNFSHPFGSDHHHQQEQQEFVISNNHQQLIELPQLDSPTSASLSAPPTTSFAVKESSSINNNNEEYCSDERNNNNNIDWKSLDNLFADTSNYFSNPNMSQFMTINHHLGCFPGS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03147 340 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Aip09g03147 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 323 - -
Aip09g03147 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 323 - -
Aip09g03147 340 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
Aip09g03147 340 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Aip09g03147 340 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03147 Aip-Chr9 136721959 136726602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03147 14 340 NAC Transcription Factor Family AT1G71930 54.000 2.77e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip09g03147 NAM 7.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03147 - - gmx:100811057 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03147 09 136721959 136726602 Aip09g03147 09 136721959 136726602 ECH