Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03142 ATGCCGTCGAAGCATGCGACGTACATTCCCCACACCGCTGGTAGGTACTCGGTGAAGCGTTTCAGGAAGGCACAGTGCCTGATTGTTGAGAGGCTCACTAACTCCCTCATGATGCATGGAAGAAACAACAGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGAAAATCATTCACTTGCTTACTGACCAAAACCCTATCCAAGTCATCGTTGATGCCATTATCAACAGGCTGGAGTCTGTGACAGCGTCGATGGCACGGTTACGTGAGGGGATGGAAGGGGTTATATTCGCGGTGAGGCTCCAACAGCAGAGGAGGCGGCACAGAGCTGCTCCGGAAGGGGATGAAGCTGCTTCGGGATGGGGACGGCCATGCTGA 384 0.526 MPSKHATYIPHTAGRYSVKRFRKAQCLIVERLTNSLMMHGRNNSKKLMAVRIIKHAMKIIHLLTDQNPIQVIVDAIINRLESVTASMARLREGMEGVIFAVRLQQQRRRHRAAPEGDEAASGWGRPC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03142 127 Pfam Ribosomal protein S7p/S5e 18 112 IPR023798 -
Aip09g03142 127 Gene3D Ribosomal protein S7 domain 1 114 IPR036823 -
Aip09g03142 127 SUPERFAMILY Ribosomal protein S7 6 110 IPR036823 -
Aip09g03142 127 PANTHER 40S RIBOSOMAL PROTEIN S5 2 80 - -
Aip09g03142 127 PANTHER RIBOSOMAL PROTEIN S7 2 80 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03142 Aip-Chr9 136645211 136645693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03142 2 78 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 87.013 4.91e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03142 K02989 - nnu:104597654 149.443