Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03139 ATGTCTTCTCATCATCGAAGAAGCCCTGCACTCTATCTTCGTCATTCCTTCTTTCCTACCAGAGCACCAAATAACAAAACCCTAGCCGCTTCTTCAATCTCCCCTCGTGCTCTGCCGCCGTTCATCCATCTCGCAGCTCTTCCTTGTAAGGTTGTGAAAACCCTAGCCTCCATCGCGCCGCCATCAATCTCACCGTCGCCGCTCGTCGCGCTCAAGATCGCCACTAGGTTCGTCGTTCTCAAGGTCCCTCGATCCGTCGTCCGCCAATGTTTGCTTTCCAGTCCTGTTTCGCAGTTCTTCGCCGTCGTCCTTCGTCGTGTTTGTCGCCAGCTCGCCGTCTTCGAAGTAACCAAACAAGAAATTAGCCTTATTAGCCTTATTCTATTTAGTTGCAGGTTCGGATATATATCAGGAGACTCTTGCCAAGGCACTTGCAAAGCATTTTGGTGCAAGGCTACTAATTGTGGATTCCCTTTCACTACCTGGGAACTCCATCAAAGGAAGTTGATTCTGCTAAAGAAAGTTCAAAGCCTGAACGACCATCTGTGTTGGCCAAGAGAAGCACTACTATTAAAACAGACTTCAATTGATGCTGCAAACTATGACAGGGTAATGTTACTGGGTGGAAGAGCGCCAGAGTATCTTGCTCATGATCCTCTTGTGGCACTGGTGATCAAGCTTTTCAGTTCTGGAAAAGCACTTGCTTCCATTTGCCTCGGACAATTGATTCTGGCGGCTGCAGGTGTAGCTAAAGATCACAAATTTACCGTTTTTCCTCCTGTTAAACCAGCACCGGTTGCCTCTGGTGCTCATTGGGTTGAACCAGACACTAGCAACAGTGGTGGATGGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCTGCTGCTATCAAATGCAATGGAAGGGAAGTAGTGACTAACTTTGAGGCAAGTACATATGAAGGAGAGATGAAATCTCCAGCCATCAATGAAGCAACTCCAGGACATGGTCTGAAAGAAAATAGGGGGCAACTCCAGTTCTCCTGGGTCCCTTACAGCATGCATGCTGGAAGAACAATGGTGAAAACCAATGTTAAGAAACAGTGA 1113 0.4735 MSSHHRRSPALYLRHSFFPTRAPNNKTLAASSISPRALPPFIHLAALPCKVVKTLASIAPPSISPSPLVALKIATRFVVLKVPRSVVRQCLLSSPVSQFFAVVLRRVCRQLAVFEVTKQEISLISLILFSCRFGYISGDSCQGTCKAFWCKATNCGFPFTTWELHQRKLILLKKVQSLNDHLCWPREALLLKQTSIDAANYDRVMLLGGRAPEYLAHDPLVALVIKLFSSGKALASICLGQLILAAAGVAKDHKFTVFPPVKPAPVASGAHWVEPDTSNSGGWYIYLGLFDSEVEAARAYDKAAAIKCNGREVVTNFEASTYEGEMKSPAINEATPGHGLKENRGQLQFSWVPYSMHAGRTMVKTNVKKQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03139 370 Pfam DJ-1/PfpI family 195 276 IPR002818 -
Aip09g03139 370 Gene3D AP2/ERF domain 273 319 IPR036955 GO:0003700|GO:0006355
Aip09g03139 370 SUPERFAMILY Class I glutamine amidotransferase-like 193 276 IPR029062 -
Aip09g03139 370 Gene3D - 174 272 IPR029062 -
Aip09g03139 370 PANTHER DJ-1 PROTEIN 195 280 IPR006286 -
Aip09g03139 370 SUPERFAMILY DNA-binding domain 279 319 IPR016177 GO:0003677
Aip09g03139 370 SMART rav1_2 268 324 IPR001471 GO:0003700|GO:0006355
Aip09g03139 370 PANTHER DJ-1/THIJ/PFPI FAMILY PROTEIN 195 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03139 Aip-Chr9 136619089 136624717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03139 281 336 AP2-EREBP Transcription Factor Family AT4G36920 61.404 8.05e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03139 K18881 - ahf:112701227 165.622